Erigeron canadensis (horseweed): 122598266
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Entry
122598266 CDS
T07610
Name
(RefSeq) ATP-dependent DNA helicase Q-like 5
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecad03032
]
122598266
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122598266
Enzymes [BR:
ecad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
122598266
DNA replication proteins [BR:
ecad03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
122598266
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
122598266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF5751
ResIII
Motif
Other DBs
NCBI-GeneID:
122598266
NCBI-ProteinID:
XP_043626799
LinkDB
All DBs
Position
4:complement(946156..953129)
Genome browser
AA seq
966 aa
AA seq
DB search
MDPSDSDSDGSHISSTPPRHPSPPPRHHQLLHLLSIPKSRSKSNSTSSRPTLKFKPPSKK
PKPNPHPEPVPGPETRQPDPIHSPSISFSCNVVKPRTYDPLHNNDNNIDIGVSSCLAKTT
SSFARFRNRNLDFESTENVIENSAEAEGNAGDVKVVGVRNRINLIGNSVEEVKKSNVVEN
VGQGNVGDVKVVGIRDRIDLIGKSVGTAEQVKKPKVGVNEGNFVKLNINGHGGRKKFGYK
VRKKNQNAYNGNRKGYRRSKKKLKRVGEGADEENGLCDEEGELEGMEFEGDEIRVDKELI
ENLADDVRRDPCDENLVKLLKVIHGYDSFRDGQLEVIKMILDGKSSMVILPTGAGKSLCY
QLPALVLEGMTLVISPLVALMFDQLKQLPPGIPGGLLCSSQTLEESSETLRRVQEGSLKV
LFISPERLLSAGFTSIFAGTSLISLVVIDEAHCISEWSHNFRPSYMRLRASLLRSILGVD
CFLAMTATATTKTMNDVMCSLDIPYTNLVQAAQVRDNLQLSVSLSEHRMKDLMALLKDPP
YTEIKSIIIYCKYQSETDMISKFLRDSNIRAKSYHSGIPAKERRRTQELFCSNKIRVIVA
TVAFGMGLDKGDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFFDETTYFKLRSLM
YSDGLDQYTVNKFLSHVFAGDSLSQGKVCSLVKESASRKFDMKEEVILTILTRLELAEVQ
YLHLLPQTSVTCVLNFHMTSPALLAAKDIVISAILKKSEIKDGQYVFDIPTVAFSIGAQA
LTVTNQLQILKSKGEVTYELKDLAYCYTIINFPKDICSLAADLAKWLSEVESGQVRKVDA
MFNAALFAVKTCDRKSGCTGSQHTPCLQKKILDYFNAENDDKISNTMGQTSRFLRADIKV
FLQSNSHAKFTPRAIARIMHGIASPAFPSSIWSRTHFWGRYMQTNFDVIMEAAKAELMDC
VGKSAV
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggatccctccgattcagattccgacggatctcacatctcctcaactcctccacgtcac
ccgtcaccaccgccacgtcaccatcagcttcttcatcttctttccatccccaaatccaga
tccaaatccaattccacttcttcacgcccgaccttgaaattcaaaccaccctccaaaaaa
cccaaaccaaacccacacccagaacccgtacccggacctgaaacccgccaacccgacccg
attcattccccctctatttcatttagttgtaatgttgttaaaccaagaacttatgatccc
cttcataataatgataacaacattgatattggtgttagttcgtgtttagcgaaaacgacg
tcttcgtttgccaggtttcgaaatcgaaatttggattttgagtcaacagaaaatgtaatt
gaaaattcagcagaagcagaaggaaatgctggagatgttaaggttgttggtgttagaaat
aggattaatttaatcggaaactcggttgaggaagtcaaaaagtcaaatgtagtcgaaaat
gtgggccaaggaaatgttggagatgttaaggttgttggtattagggataggattgatttg
attgggaaatcggttgggaccgccgagcaagttaagaagccgaaagtgggagtgaatgaa
gggaattttgttaagttgaatataaacggtcatggtgggcgaaagaagtttgggtataaa
gtaaggaaaaagaatcaaaacgcgtataatgggaatcgaaaaggttatagaaggagtaaa
aagaagttgaaaagggtcggtgaaggggccgacgaggaaaatggtttatgtgatgaagaa
ggagaattggaaggtatggaatttgagggggacgaaataagggtcgataaggaattgatt
gagaatcttgcggatgacgtgagacgtgatccgtgtgatgagaatttggttaagttgttg
aaagttattcatgggtatgattcgtttagggacggccaattggaggtgatcaagatgata
cttgatgggaaatcaagtatggtgatattgccaacgggggctgggaagtcgctttgttat
caattgcctgctttggttttggaagggatgacacttgtgattagcccgttagttgcgctt
atgtttgatcagcttaaacaactgccacccgggattccggggggtttgttgtgtagcagt
cagactctagaagagagttctgaaacgcttagacgggttcaggaaggatctttgaaggtt
cttttcatttctcccgagagattactaagtgcaggatttacatcaatatttgctgggact
tcactcatttcgcttgttgttattgatgaagcccattgtatatctgaatggtcacataat
tttcgcccttcgtatatgaggcttagagcgtccttacttcgttctattcttggagtagat
tgctttcttgcaatgactgcaactgcgacaaccaagactatgaatgatgtgatgtgttcc
cttgatattccttatactaatcttgtacaagcagcacaagtcagggataacttgcagctg
tctgtatctttgagtgagcataggatgaaggatttgatggcattgctcaaggatccacct
tacacagagattaaaagcattataatttactgcaagtatcagtcggaaactgatatgatc
agcaagtttttacgtgatagcaatatccgtgcaaagagttaccatagtgggatccctgct
aaagaacgaaggcgcacacaagagttattttgttcaaacaagatacgagtgattgttgca
actgtcgcatttggtatggggctcgataaaggtgatgtcggagctgtaattcactacagt
ttaccagaaagcttggaagagtatgttcaggaaattgggcgtgctggtcgtgatggccgt
ttatcttattgtcatctcttttttgatgaaacaacatactttaagctcaggagtcttatg
tacagcgatgggttagatcaatacacggtcaataagttcctctctcatgtttttgctggg
gattcactttcacaaggaaaggtttgctccctagtcaaggaatctgcttctcggaaattt
gacatgaaagaagaggtgattctgactatcttaactcgcttggagttagctgaagtgcag
tacttgcatttacttccccaaacgagtgtcacatgtgtgttaaatttccacatgacctcc
ccagcattacttgctgctaaggacattgtgatttcggcaattttgaagaagtctgaaata
aaggatggtcaatatgtgtttgacattccgactgtagcctttagcattggagctcaagcc
cttacagtaactaatcagctgcagattctaaagtcgaagggagaagttacatacgaattg
aaggatctagcttattgttacaccattataaattttccaaaagatatatgctctttggca
gcagatctggctaaatggttatcagaggttgagagtggccaggtgcgtaaagtagatgca
atgttcaatgctgcactctttgcagtgaaaacatgtgatagaaaaagtggttgcactggc
tctcaacacacaccatgcttgcagaagaagatcttggattacttcaatgcagaaaatgat
gacaagatttcaaatacaatgggccaaaccagccggtttttgagagcagatattaaggtg
tttcttcagagcaactctcatgccaaatttacgcctagagcaattgctaggataatgcat
ggtatagccagtccagcatttccttcttcaatttggtctagaactcatttttgggggaga
tatatgcaaacaaactttgatgtaattatggaagcagcaaaagcagagctaatggattgt
gtaggaaaatctgcagtttaa
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