Erigeron canadensis (horseweed): 122598371
Help
Entry
122598371 CDS
T07610
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122598371
03012 Translation factors [BR:
ecad03012
]
122598371
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122598371
mRNA cycle factors
Stress granule specific factors
122598371
Translation factors [BR:
ecad03012
]
Eukaryotic type
Initiation factors
eIF-4
122598371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
122598371
NCBI-ProteinID:
XP_043626898
LinkDB
All DBs
Position
4:complement(24451795..24463657)
Genome browser
AA seq
1785 aa
AA seq
DB search
MSVNQSRGADKNEFKRSGRSGNPNSPRNYPGVGGGKGGGGGGTTTAPPSGTNSYSGNKSF
KKVVANNAQGAQNRGPGSNPNVNSNYSSGGGRGAPNGPHNQPSSRGTSDVSSTGAPAKLA
DSSVQKSSPGLPKAPQSHPASHSSGTTGATGSTTPVKGSGDASRAFPLQFGSINPGVMNG
MQVPARTNSAPPNLDEQKRAQARLDSLKAAAYQNQAASKQHLTRKDTRPVDQPNVSEAPP
TSRDKKEVLSSAPPVTVHSQKPTGPPVPSVPGVSMQMPFPQSQIHLPFGGPNPPLQSQPM
VNTSLAVPLPMHIPQVQPQVFVPSIQHHQGIIHPSQGLTFSPQMAQLGNMGMGLGPQYPQ
QSMGNLNFGGARRTVKITHPDTHEELRLDKRTDGYLNGGTSGSRPHPHGQPQSQAVPSFP
PSHPINYYPGYNLNPLYFPTHGGTQSTSGSQAPRFYNQPSKQVTVKPAVSHVEKVAGSSP
SIEKSDTTKSQKSVTEGTTGQPHKDSETNSASSLPHLEKSDITKSQKAVAEGTSGQPQKD
SETNTGSCLPQLEKCDTTESQEAAAEGTSGQPHKDSETNAGSSLQQLEKSDITNSQDAVA
EDTSGEPNNAGSSLPQLGNLKNTIAASAPVEDCVPPVNSLPEVVKETMFDRSGLLQEEQK
QPGKEVFSVPVDKIDGQSSFVSSLSVGHLNSKDIGVQETSKPSTLSMQTSNKAVPSNVAD
ESVSRCESYEKDVDSTEIIGSGTHPDNPLLGGEPIAEVVVPEEPVKDPADQNQDSTVSDA
TGAQQKEPINDTDDKSSGSISTSDHGDQISNLDDHSNKFNGRDVDQVNNPVTSTEESPAI
SLSVPEAPSALEVETTGPISPSSSKVKGNASKGRKKIREILKNADARGTTSDLYNAYKRP
EDKKDTSSAVENPSVNFPEKEVLLDEKRGPTKYEPDDWEDAADNSTPKMETGLKHHSEDD
NEGMTKKYSRDFLLKFSDHCTDLPVGFEITPEITEALSVSGVNLVRDSYPSPGRGGDRAV
SGPRLDRRLSNLGLDVSWNKGPGTMAPGTMSPGWDPRVEMNFPGRGVNHGVLRTPRGQPP
GQYIGGILYGQMQSPGQLGVPMQRNNSDSDRWQRGTNFQKGLIPSPHTPVMHKAERKYEV
GKITDQEQAKQRQLKGILNKLTPQNFEKLFDQVKQVNIDNADTLSGVIGQIFDKALMEPT
FVEMYANFCSRLSVELPDFSENNEKITFKRLLLNKCQEEFERGEREEEEANRTEEEGEVK
QTEEEREEKRVKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGVNQTPDPDEENIE
ALCKLMSTIGEMIDHPKAKEHMDVYFDMMLKLSNNMDYSSRVRFMLKDAIDLRKNKWQQR
RKVEGPKKIDEVHREAAQERQAQANRLARGPSSNPSTRRAQMDFGPRGSNVLPSTPQMGG
YRGLPQQFRAYGNPDPRLDTFETRPLSVPLRTMNDDTITLGPQGGLARGMSIRGQPSMQG
IPLHDVDSRRGVAGPNGYGSMSERAGYGQEDLASRWFSRPIYDPSNIQEQNMNYVNRDTR
NAGRGFVQVSPSSPPEHARVTTPLQSGPSDTVMSEEHLHDKSIETIKEFYSARDEKEVAL
CIRDLNAPSFYPSMISIWVIDSFERKDVDRESLTKLLVNLARSRDGILSQESLVRGFESV
LSTLEDAVNDAPKAAEFLGRIFAKVLLENVIPYTEVWRLIYEGGEEQGRLVEIGLAAEVL
GVILEIIKAEKGDPFLNNMRMGSDLRLENFRPPTIKKTLRLDKFI
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaatcaatcaagaggtgctgacaaaaacgaattcaaaagatcgggtcgatcc
ggtaacccgaattcgccaagaaactatcccggcgtcggtggtgggaagggtggcggtgga
ggtggcactaccaccgcccctccttccggtactaattcttattccggtaataaaagtttt
aagaaagtggttgctaataatgctcaaggagcacagaatagaggacctggttcgaacccg
aatgtaaattcgaattattcgagtggtggtgggagaggtgcacctaatgggccacataat
caaccgtcgtcaagaggaacttctgatgtttcatctacaggggctcctgcaaagttggcg
gattcatcagtccaaaagagcagcccaggcctgccaaaggctccacaaagccatccagct
tctcacagttctggcaccactggtgccacaggttccaccactcctgtcaagggttccggg
gatgcttccagggcttttccacttcagtttggatctattaatcctggtgttatgaatgga
atgcaggtacctgctcgaaccaactctgctcctcccaatttggatgagcaaaaacgggct
caggcgcgtcttgattccttaaaagctgctgcttatcaaaatcaagctgcttcaaaacaa
cacttaacaagaaaagataccagacctgttgatcagcctaatgtctcagaggcccctcct
acctcaagagataaaaaggaagtgctttcttcagctccccccgttacagtacactctcag
aaaccaactggtcctcctgtaccttctgtaccaggggtttctatgcaaatgccatttccc
caatctcaaattcatcttccttttggtggcccaaatccaccattgcaatcccagcccatg
gtcaatacctcattggcagtgccactccccatgcatatacctcaagtccaaccacaggta
tttgtcccgagcatccaacatcatcaggggatcattcatccaagtcaaggtttgactttc
tcacctcagatggctcagctcggaaatatggggatggggctaggaccgcaatacccacaa
cagtctatggggaatctgaattttggtggtgcacgtagaacagtaaagataactcaccca
gatactcatgaggagctacggttagataaaaggaccgatggctatctgaatggcgggaca
tctggttcaagaccacaccctcatgggcagcctcagtctcaggcggttccatcttttcca
ccttctcacccgattaactattatcccggatataatctcaatcccctttatttcccgaca
catggtggtacacagagcacttctggttctcaagcacctcggttttataatcagccttct
aaacaggtgacagtaaaaccggcagtttcacacgttgaaaaggttgctggttcatcaccg
agcatagagaaaagtgacactactaaaagtcaaaagtcagttacagaaggtaccactggt
caacctcataaggattcagaaacgaattctgctagctctttaccgcatttggaaaaaagt
gacattactaaaagtcaaaaggcagttgcagaaggtacctctggtcaacctcaaaaggat
tcagagacaaatactggtagctgtttaccacaattggagaaatgtgacactactgaaagt
caagaggcagctgcagaaggtacctctggtcaacctcacaaggattcagagacaaatgct
ggtagctctttacaacaattggagaaaagtgacattactaatagtcaagacgcagttgca
gaagatacctctggtgaacctaataatgctggtagctctttaccacaactggggaatttg
aaaaatactattgctgcttccgctcctgttgaggattgcgtgccacctgtgaatagtctg
cctgaagttgtaaaagaaacaatgtttgacagatctggattgcttcaagaggaacagaag
cagcccgggaaagaggtcttttctgtccctgtagacaagatcgatgggcaatcttccttt
gtttcaagcttatcagtaggacatcttaattccaaggatattggtgttcaagaaacatca
aagccttctactctttccatgcaaactagcaataaagcagtgccttcaaatgttgctgat
gagtctgtttccaggtgtgagagttatgaaaaagacgttgactctaccgaaattattggt
tctggaacccatcctgataacccccttttaggaggagaaccaatagctgaagttgttgtg
ccagaagaaccagtcaaagatcctgccgaccaaaatcaagatagcacagtctcagatgca
actggtgcacaacaaaaagaacccattaatgatactgacgataaatcatcagggtcaatt
tccacttctgatcatggtgatcagatctccaatctggatgatcattcaaataagtttaat
gggagagatgttgaccaagtcaataatcccgtaacgtcaactgaagagtcacctgccatt
tcactttctgttccagaagcaccttcagctttagaggtagaaactacaggcccgatttct
ccatcttctagtaaagtcaagggtaatgcatctaaagggaggaaaaaaataagagagatc
ttgaaaaatgctgatgctcgcgggactacttctgatctttataatgcatataaacgtcca
gaagataagaaagatacttcatctgctgtagaaaatccatcagttaattttccagaaaaa
gaggttttgttggatgagaaacgtggtcctaccaaatatgaacctgatgactgggaggat
gctgcagacaattctactcccaaaatggaaacaggtttgaaacatcacagtgaggatgac
aatgaaggaatgacaaagaagtattccagagacttcctactgaaattctcggaccactgt
actgatcttcctgtaggttttgaaataacacccgaaataactgaagctttgtcggtatca
ggtgtcaatttggttcgtgattcgtacccaagtccaggtagaggcggtgacagggcagtg
tcagggccacggcttgaccgtcgcttaagtaatttaggtttagatgtcagttggaataaa
gggccaggaacaatggctccaggaaccatgtctccaggatgggacccaagagttgaaatg
aattttcctggaagaggcgttaaccatggcgtgttacgaaccccacgtggtcagccacct
ggtcagtacattggtggcattttatatggacaaatgcagtcccctggtcaactaggcgtt
cctatgcaacgaaataactcagattctgataggtggcaacgtggtactaattttcagaag
ggcttaataccttctccacacaccccagtgatgcataaagctgaaagaaagtatgaagtt
ggtaaaataaccgaccaagagcaagcaaaacaaagacaattgaaaggtattctgaacaag
ttgactccacagaatttcgaaaaattgtttgatcaagtcaaacaagtcaacattgacaat
gccgatactctatctggtgttattggacaaatattcgataaggctttgatggaaccgact
tttgtagaaatgtacgccaatttttgttctcggttatctgtggagcttcctgattttagt
gaaaataacgagaagattacttttaagagattattattaaataaatgtcaagaggaattt
gaaagaggggagagagaagaagaagaagctaatagaactgaagaagaaggtgaagttaag
cagacagaagaggaacgggaggaaaaaagagtcaaggcccgaagacgcatgctgggtaat
attagacttattggtgaattgtacaagaaaagaatgttgaccgaaagaattatgcatgaa
tgtataaagaaactcttaggcgttaatcagacccctgatcctgatgaggaaaatatcgag
gcattatgcaaattaatgagcactataggggagatgattgatcacccaaaagctaaagaa
cacatggatgtgtattttgatatgatgcttaagttatcaaataatatggattattcttca
cgagtgagattcatgttaaaagatgcaattgaccttagaaaaaacaaatggcagcaacga
aggaaggttgaaggtccaaaaaagatcgacgaagtgcatagggaagctgctcaagaacgt
caggctcaagctaatcgattggcccgtggacctagttccaacccatcgactagaagggct
cagatggactttggacctagagggtcgaacgttttaccttcaacccctcaaatgggtggt
tatcgtggattaccccaacagtttcgggcttatggaaatccagatccaagacttgacact
tttgagactaggccattgtcggttcctttgagaaccatgaatgatgacactattaccctc
gggccccaaggtggtttagcaaggggaatgtcaattaggggccagccatcaatgcaaggc
ataccattgcatgacgtggactctagaagaggagttgctggtcctaatggttatggttcc
atgtctgagagagcaggttatgggcaagaagatttagcttcaagatggttttctcggcca
atttatgacccatccaatatacaggaacaaaacatgaactatgtgaacagggacacgagg
aatgcaggccgcggttttgttcaggtttcaccatcatcaccacctgaacatgccagagtg
actactccactacaaagtggtccttcagatacggtcatgtctgaagagcatttacatgat
aagtccatagagacgattaaagagttctacagtgcaagagatgaaaaagaagttgctttg
tgcatcagagatctgaatgcacccagtttctatccatcgatgatatccatttgggtcatt
gattcttttgagaggaaagacgtggatcgggaatcacttactaaacttctcgttaatctt
gctagatctcgggacggaattctaagtcaggaatcgcttgttagaggatttgaatctgtt
ttatcaacactggaggatgctgtgaatgatgcaccaaaagctgcagagtttcttggtcgt
atctttgcaaaagtgcttttagagaacgtcatcccttacacagaagtgtggcgtttgata
tatgaaggtggagaagagcaaggaagacttgtggaaataggtctagcagccgaggttctt
ggagtcattttggagatcattaaagcagaaaaaggtgacccctttttaaataatatgcgt
atgggttctgatcttcggttagagaacttccgtcctccaacaatcaagaaaacgttgagg
ttagataagtttatctag
DBGET
integrated database retrieval system
