Erigeron canadensis (horseweed): 122598484
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Entry
122598484 CDS
T07610
Name
(RefSeq) ras-related protein Rab5-like
KO
K07887
Ras-related protein Rab-5A
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04144
Endocytosis
ecad04145
Phagosome
ecad04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122598484
04145 Phagosome
122598484
04148 Efferocytosis
122598484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122598484
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122598484
04031 GTP-binding proteins [BR:
ecad04031
]
122598484
Membrane trafficking [BR:
ecad04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
122598484
Endosome - Lysosome transport
122598484
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122598484
Exosomal proteins of other body fluids (saliva and urine)
122598484
Exosomal proteins of colorectal cancer cells
122598484
Exosomal proteins of bladder cancer cells
122598484
GTP-binding proteins [BR:
ecad04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
122598484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
AAA_24
ATP_bind_1
MMR_HSR1_Xtn
SRPRB
TsaE
NDUS4
ATPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
122598484
NCBI-ProteinID:
XP_043627010
LinkDB
All DBs
Position
4:complement(37978149..37979734)
Genome browser
AA seq
205 aa
AA seq
DB search
MVGANNIASKNVQAKLVILGDMGTGKTSMILRFVKGQFFDFQESTIGAAFFTQVVSINNT
TVKFDIWDTAGQERYHSLAPMYYRAAAAAIVVYDINTMSSFQKAKKWIEELQRQGNPDTI
MVLVANKADMITKREVDPEEAKQYAKENGLKYFETSAKTAQNIQELFYEIATEVAQAAPS
PSMPSGMKLQSETQERRKKLFCCNT
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagctaataacattgcgagtaaaaacgtacaagccaagttggtgatcctaggt
gacatgggaactgggaaaacaagtatgatcttgagatttgttaaaggccaattttttgac
ttccaggagtccacaatcggagctgccttctttacacaggttgtgtcaataaataacact
acggtgaagtttgatatatgggacacggctgggcaagaacgttatcacagcttagctcca
atgtactatcgtgcagcagctgcggctattgttgtgtatgatatcaacaccatgtcttca
tttcaaaaagcaaagaaatggattgaagaactacagaggcagggtaacccggatactatt
atggttttagtggcaaacaaagcagatatgattactaaaagagaggttgatcctgaggaa
gcgaagcaatatgctaaagaaaatggcttgaaatatttcgagacttctgctaaaacagcg
caaaacatacaagagctcttctatgaaatagcaacggaagttgcacaagctgccccatca
ccatcaatgccgagcggaatgaaactacaaagtgaaacacaagagagacgtaaaaaatta
ttctgctgcaatacatga
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integrated database retrieval system