Erigeron canadensis (horseweed): 122598522
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Entry
122598522 CDS
T07610
Name
(RefSeq) structural maintenance of chromosomes protein 2-1-like
KO
K06674
structural maintenance of chromosome 2
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecad03036
]
122598522
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
122598522
Condensin II
122598522
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
APG6_N
BST2
Crescentin
ABC_tran
Motif
Other DBs
NCBI-GeneID:
122598522
NCBI-ProteinID:
XP_043627051
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All DBs
Position
4:complement(39925396..39932751)
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AA seq
1176 aa
AA seq
DB search
MHIKEVCLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRAS
NLQELVYKQGQAGITKATVSVVFDNSDRSRSPLGYEDCSEITVTRQIVVGGRNKYLINGH
IAQPTRVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKDA
ALKTLEKKQAKVDEINKLLDQEILPALEKLRKERMQYMQWSNGNAELDRLKRFCIAYEYV
EAEKIRDSAVHGVDEIKAKITEIDNDMQMTQIQVQEMETHVSKLTAEKDATMGGEVKGLS
DRVDAISCDLVKETSVVKNQEDNLKTEIKNASKIAKNIEELKQSVEDKVSAVKSAEDGAA
DLKKRAEEFAKSLEDHEKEYQGVVAGRSSGNEEKCLEDQLGDAKVAVGKAETELKQLKTK
ISHSEKELKENKNKLSSKRDEAVSVEKELKVRQKEVETVEKALSSLSYEEGQMEGLQKDR
ELELKFVDKIKEDIRNISSCLGNIEFSYRDPVKNFDRSKVKGVVAKLIRVKDSSTMTALE
VCAGGKLYNIVVDNENTSKQLLDNGQLRGRVTIIPLNKIQRHVVEPRIQNKAATKFGKGN
AEVALSLVGYHNELQSAMEYVFGSTLVCKTKEIAQEVAFNREFGTKSVSLDGDIYMPSGL
LTGGSRKNGGDLLRQLHALGEAESELSLHQKRLSEIDSKISEILPFYKKYTELRKELELK
AYELSLFKTRAEQNEHHKLSEIVKRIEQELAEAKVAVNEKQAHFKECASEVANLEKSIHD
HANNRDRRLKDLEKKIKEVKTKMQAASKDLKGHENEREKLIMEVEAVKQEQASLENQLVA
LQKQISVLTSEVDALKTKVSLLKDEHSLAQSELNAARVKVKECDSQISSILKEQQKLKNR
IGEKNLERKKLENEVKRMEMEQKDCSSKVDKLIEKHGWITSEKQLFGRSGSDYDFTSRDP
HIAREQFEKLQAEQAGLEKRVNKKVMALFEKAEDEYNDLISKKNIIENDKSKIKLVIEEL
DEKKKETLKVTWVKVNSDFGSIFSTLLPGTMAKLEPPEGGTFLDGLEVRVAFGGVWKQSL
SELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIV
VSLKEGMFNNANVLFRTKFVDGVSTVQRTVASKQSK
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaaagaagtttgtttggaaggattcaaatcgtacgcaacacggactgttgtt
ccgggtttcgacccgtttttcaacgcgataacgggtttaaacggatcgggtaaatcgaac
attcttgattcgatttgttttgttttgggtattactaatttgcagcaggttcgagcttcg
aatcttcaagaacttgtttataagcaagggcaagctgggattacaaaagcaacggtttcg
gttgtgttcgataactcggatagaagtagaagccctcttggttatgaagattgttccgaa
attaccgtcactcgacagattgtggttggtgggaggaacaaatacttgatcaatgggcac
attgcacagccaactagagtgcaaaatcttttccattcggtgcagctaaatgtcaacaat
ccacatttcttgattatgcaagggcggattacaaaggtgttaaacatgaagccccctgaa
atattgtccatgcttgaagaagctgctggaacaagaatgtatgaaacaaaaaaagatgct
gctttaaagacccttgagaaaaagcaggctaaggttgatgagattaacaagcttcttgat
caagaaatacttcctgcgctagaaaagttgaggaaagaacgaatgcagtacatgcaatgg
tctaatgggaatgcggagttagataggttgaaaaggttttgtattgcttatgaatatgta
gaagcagagaagattcgagatagtgcggttcatggtgttgatgagataaaggccaagata
accgagattgacaatgatatgcagatgacacagatccaggttcaagagatggaaacacat
gtatcaaagttaactgctgaaaaagatgcgaccatgggtggggaagttaaaggtttatca
gatcgagttgatgccatttcttgtgatcttgttaaagaaacttctgtagttaaaaatcaa
gaagacaatctcaagaccgagataaagaatgctagtaagattgcaaaaaatattgaagag
ctgaagcagtctgtggaagataaagtttcagctgtaaagagcgcagaagatggtgcagct
gatctgaagaaaagagcagaggagtttgcaaagagtttggaagatcatgagaaagaatac
cagggtgtagttgctggtaggagtagtggtaatgaagagaaatgtctcgaagatcagcta
ggtgatgctaaagtggctgttggaaaggcagaaactgagctgaagcaattgaaaacaaag
ataagtcacagtgaaaaggaactaaaagaaaacaaaaataagctatcatcaaagcgtgat
gaagctgttagtgtagaaaaggagctgaaagtcagacagaaagaagtagaaactgttgaa
aaggctttgagttcactttcgtatgaggaaggacagatggagggtttacaaaaggatcga
gagttggagttaaaattcgtggataagataaaagaggatattcggaatatttcttcatgt
ttaggaaacattgaattttcttatcgtgatcctgtgaagaactttgacaggtcaaaagtc
aaaggtgtggttgcaaagctcatcagagtgaaagatagctcaacgatgacggctttggag
gtatgtgcaggtgggaagttgtataatattgtggtcgacaatgaaaacaccagtaaacaa
cttttagataatggacagcttagaggaagagtcacaattattcctttaaacaaaatccaa
cgccatgttgttgaacctagaattcaaaataaagctgctactaagtttggtaaaggcaat
gctgaagttgctctttcattggttggctatcataatgaacttcagagtgctatggaatat
gttttcggatcaaccttagtctgcaagaccaaggagattgcacaagaggtcgctttcaat
cgagagtttggtaccaaaagtgtgtcgttggatggcgatatatatatgccaagtggactt
ctgactggtggctctcgaaaaaatggcggtgatttattaaggcaactacatgctttggga
gaggcagaatcagaattatcgttacatcagaagcggctatcagaaattgattccaagatc
agtgagattcttccattttataaaaagtatactgagctaaggaaagagctggaactcaag
gcatatgaactctcattattcaagactagggccgagcaaaatgagcatcataagcttagt
gaaatagtgaaaaggattgagcaggagctcgcagaagcaaaagttgcagttaatgaaaag
caagcacactttaaagaatgcgctagtgaagtggcaaatcttgaaaaatcaattcatgat
catgctaataatcgggatcgtaggctcaaagatctggagaaaaagatcaaggaagtgaag
acaaaaatgcaagcagcttcaaaagacctcaaggggcatgaaaatgaaagggaaaaactt
attatggaagttgaagctgtgaaacaagaacaagcatcattggaaaatcaactagttgca
ttgcagaagcagattagcgtgttaacttctgaagtggatgctctcaagaccaaggtatct
ttattgaaagatgaacatagtctagcacaatctgagctgaatgccgcccgcgtgaaggtg
aaggagtgtgattcacaaataagcagcattcttaaagagcaacaaaagcttaagaacagg
atcggtgagaaaaatcttgaaaggaaaaagttagaaaacgaggtgaaacgcatggagatg
gaacaaaaagattgttcatcgaaggtagataaattgattgaaaagcatggttggataact
tccgagaaacaacttttcggaagaagtggaagtgactacgatttcacatcacgtgatccg
cacatagcaagagaacaatttgaaaaactccaggctgaacaagcaggccttgagaagaga
gtgaacaagaaagttatggccttgttcgagaaagcagaagacgaatacaatgacttgata
tccaagaaaaacattattgagaatgacaagtcaaagattaaactcgtgattgaagagcta
gatgagaagaaaaaggagacactgaaagtcacatgggttaaggttaatagtgattttggc
tctatattttctactttgttgcccggaacaatggcaaaactagaacccccagagggtggt
acctttttggatgggttagaggtgcgtgtagcctttgggggtgtttggaaacaatcattg
tcagaacttagtggaggacaaagatcgctacttgcactttcactaattttggcgttgctt
ctcttcaaaccagctccactttatatactggatgaggttgatgcagcccttgatctaagt
cacacacagaacattgggaggatgatcaaagctcattttccacattcacagttcattgtc
gtctccctgaaagaaggcatgttcaacaatgctaatgttcttttccgaaccaagtttgtg
gatggagtctccactgttcagagaacggttgcatcaaagcagagtaaataa
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