Erigeron canadensis (horseweed): 122598557
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Entry
122598557 CDS
T07610
Name
(RefSeq) KH domain-containing protein HEN4
KO
K21444
poly(rC)-binding protein 3/4
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122598557
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122598557
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
122598557
NCBI-ProteinID:
XP_043627083
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Position
4:42312733..42318611
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AA seq
647 aa
AA seq
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MDTHTPFPNKRLFDHSTVDHPSSASKRRHHHNHHHHHLPSSPATPHNNPFRNPIKLSPGE
TLFRILCPSSKTGGLIGKGGSVIRQVREETGAKIRIDESIPGSEERVIYIVASDCSNNSK
NDSSNDSNSKNDSSEKIDGENVEFRSGEGSESLAQKTLLRIFERILKVDEERNKVVLKEE
NENEVGEGGSAGEGIPQGPVVCRLLAGSNQIGCVLGRGGKIIEKIRQESGAQVRVLPKDQ
LPDCASPGDELIQMAGKFLAVKKAILAVSSCLQEAGNSVSNKPVGMVPHGYGNEPHHRMG
MEEEVVFRLLCPADKVGSLIGKGGSTRRALQAETGASIKISDPSAELDERVVVISALESL
EQRHSPAQDAVMRVHGRIAEMGFEPGVAIVARLLVHSRQIGCLWGKGGMIISEMRRVTGA
SIQIFPKEQIAKYAMPGDEVVQVIGSLPCVQDALFQITGRLRETVFPMKPYFPNAYMGPY
PEMPPPSFRPRHDPEHPPIGPFEPPPPFLHGVDHVRPDYSYSYGNERPGYGPPVNRHFQS
GSNRYAGEMTEFEGGFAKVNDPSGRNEMSGMQIINVEIVIPENYLGCVYGENKSNLGHIK
EISGAKVAIHDEGGLVVLTGTVDETHTAQCLLHAFILCEQHLTRVGL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggatacacacactccttttccaaacaaacgcctctttgaccattcaactgttgaccat
ccttcttcagcctccaaacgccgtcatcaccacaaccaccaccaccaccatctcccatca
tctccggccacacctcacaacaatccatttcgaaaccctatcaaactctctccaggagaa
actctgtttcgcatcctctgccctagctcaaaaaccggcggccttatcggtaaaggcggc
tccgttatccgtcaagtacgcgaagaaaccggcgctaagattcgtatcgatgaatctatt
ccaggttctgaagagcgtgtcatatatatagttgcatctgattgtagtaataacagtaag
aatgatagtagtaatgatagtaatagtaagaatgatagtagtgaaaaaatcgatggtgag
aatgtggaatttaggagtggagaggggtcggaatcgttagcgcaaaagacgttattgagg
atttttgagaggatattgaaagtggatgaagagaggaataaggtggtgttgaaagaggag
aatgagaatgaggttggggaaggaggcagtgcgggtgagggaataccgcaggggccggtt
gtgtgtaggttgttggctgggagtaatcagataggatgtgtgcttgggaggggtgggaag
attatcgaaaagattaggcaggagagtggtgctcaagttagggttttgccgaaagatcag
cttccggattgtgcttcccctggcgatgagttgattcagatggctggaaagtttttagca
gtgaagaaagccattctagccgtatcaagctgtcttcaggaagcaggcaactctgttagt
aacaagcctgtgggaatggtgcctcatggatatggtaatgaaccccaccacaggatgggc
atggaagaagaagttgtatttagattgttgtgtccagctgacaaagttgggagtttgatt
ggtaaagggggttccaccagaagagcattgcaggcagagactggtgcatctataaaaata
tcagatccatcagccgaattagatgaacgggtggttgtaatatctgcactagagagttta
gagcaaaggcattctcctgcgcaggatgctgttatgcgggtccatggtagaattgctgag
atgggatttgaacctggtgttgccattgttgctaggcttttagtacactcacgccagatt
ggttgtctatggggtaaaggtggcatgattatttccgagatgagaagagttacaggtgct
agcatacagatatttcctaaggaacagattgcaaaatacgccatgcctggtgatgaagtt
gtgcaggtgattggcagcttaccgtgtgttcaggatgctttgtttcaaatcacaggcaga
cttcgtgaaaccgtgtttcctatgaaaccatatttcccaaatgcttatatgggtccttat
ccagaaatgccaccaccttcattcaggccaaggcatgatcctgaacatccacctattggg
ccttttgaacctccacctccttttttgcatggtgtagatcatgttcgtccagattattca
tattcttatggcaacgagcgaccaggatatggtcccccggtcaacaggcacttccagtca
ggtagcaacaggtatgcaggtgaaatgactgaatttgaagggggctttgcaaaagttaat
gacccaagtggaaggaatgaaatgtcaggaatgcaaatcataaatgttgagattgtgatt
cctgagaattatttggggtgtgtatatggcgagaacaagagtaatctaggtcatatcaaa
gagatatcaggtgcaaaggtggcgatacatgacgaaggagggctagtggtattgacgggt
acagtggatgaaactcataccgctcagtgcttgctgcacgccttcatcctttgtgagcag
cacctaacccgtgttggtttgtga
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