KEGG   Erigeron canadensis (horseweed): 122598571
Entry
122598571         CDS       T07610                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122598571
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecad03019]
    122598571
   03041 Spliceosome [BR:ecad03041]
    122598571
Messenger RNA biogenesis [BR:ecad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122598571
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122598571
Spliceosome [BR:ecad03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122598571
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 RRM_Nup35
Other DBs
NCBI-GeneID: 122598571
NCBI-ProteinID: XP_043627102
LinkDB
Position
1:complement(4384835..4387695)
AA seq 474 aa
MAKKRKSRTQQPEPVPMEEEEQQQTTTQPPQEEEPGPTVNDVVPSDPQPQQDEKILEEDI
EEEEEDPQEIEDVEEEIEEEEEESEHDEDENKETTENDVVPTTESNGVKQEGEKEEEEDM
ELEDEPVEKLLEPFSKEQLISLLKEAVSKHPDLIENVSKIADIDPAHRKIFVHGLGWDTN
SDVLISEFGKYGEIEDCKAVVDKVSGKSKGYAFILFKHRAGAQKALKEPQKKIGNRMTSC
QLASAGPVPAPPPVVQTVSEYTQRKIFVSNVAADIDPGKLTEFFAKFGEIDDGPLGLDKQ
TGKPKGFALYVYKTVEGAKKALEEPHKVFEGHTLHCQKAVDGPKPNKPFFQQGGSGGHGN
QHYGGGHGGHGHHVSKKGKFSGGGGGSGGHGHLMAPSYNTPVPPALTPALGQALTALLAT
QGGGLGNLLGLGGPPQGMPPGGGYGNQGGGGYGAPQGMQGAYPPQGGNRPPYGR
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggctaagaaacgaaagtctcgaactcaacagcccgaacctgttcccatggaggaagaa
gaacaacaacaaaccaccacccaaccaccacaagaagaagagccgggccccactgtaaac
gacgtcgttccatcagatccccaacctcaacaagatgagaagattctagaggaagatatt
gaagaagaggaagaagatcctcaagagatcgaagatgttgaagaagagatcgaggaggaa
gaagaagaatccgaacacgacgaagatgaaaataaggaaacgaccgaaaacgacgtcgtt
ccaacaaccgaatccaatggtgttaaacaagaaggagaaaaagaagaagaagaggatatg
gaattagaagatgaacctgttgagaagcttctggaaccattctcaaaagaacagcttatt
tccctcctcaaagaagccgtttccaaacaccccgatttaatcgaaaacgtgtcgaaaatc
gcagacatcgatccagctcatcgaaaaatattcgtgcacggcttaggatgggacacgaat
tcagacgtgttaataagcgaattcgggaaatatggagagattgaggattgcaaagcggtt
gtggataaggtctctgggaaatcgaaagggtatgcttttattttgtttaaacatagggca
ggtgctcagaaagccttaaaggaaccccagaagaaaatcggaaaccggatgacgtcgtgc
caattggcgtctgctggaccggttcctgcgcctccccctgttgtacagactgtgtctgag
tatacgcagaggaagatatttgttagtaatgtggctgcggatatcgatcctgggaaattg
accgagttttttgccaagtttggggagatcgatgatgggcctttggggttggataagcag
actgggaaaccgaaagggtttgcgttgtatgtgtataagacggttgaaggggcgaaaaag
gcgttggaggaaccccacaaggtgtttgagggacatacgttgcattgtcagaaggctgtt
gatgggcctaaaccgaataagccgtttttccagcagggtggaagtggtgggcatgggaat
cagcattatggtggtggacatggaggacatgggcatcatgtttcgaaaaagggcaagttt
tcgggaggtggaggaggaagtggtggacatgggcatttgatggccccgtcttataacact
ccggttccacctgcgttgacaccggctttgggacaagcgttgactgcgttgcttgcaact
caaggaggtggacttgggaatcttttaggattaggtggacctccacaagggatgcccccc
ggtggtggctatggcaatcaaggtggcggaggctatggtgctccacaagggatgcagggt
gcctaccctccacagggcggcaatcgaccaccttatggtcgctag

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