Erigeron canadensis (horseweed): 122598701
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Entry
122598701 CDS
T07610
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03015
mRNA surveillance pathway
ecad04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122598701
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122598701
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecad01009
]
122598701
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122598701
03036 Chromosome and associated proteins [BR:
ecad03036
]
122598701
Protein phosphatases and associated proteins [BR:
ecad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122598701
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122598701
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122598701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPP2R1A-like_HEAT
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EF3_N
HEAT_EZ
PDS5
CLASP_N
RTP1_C1
TAF6_C
Cnd1
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
122598701
NCBI-ProteinID:
XP_043627211
LinkDB
All DBs
Position
4:complement(30074571..30081148)
Genome browser
AA seq
587 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNDDIQLRLNSIRKLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGLEYAHVLLPPLETLCIVEETCVRDKAVESLCRIGSQMRET
DLVDWFIPLVKRLAGGEWFTARVSACGLFHIAYPSASEMLKAELRSIYSQLCQDDMPMVR
RSASTNLGKFAATVEPTHLKTDVMQIFQDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVSFSQDKSWRVRYMVANQLYELCEAVGTEPTKTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFSRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIREAAANNLKRLAEEFGPDWAMQHIVPQV
LEMVNNPHYLYRMTILSAISLLAPVLGSEITCSKLLPVVVVLAKDRVANIRFNVAKVLQS
FIPIVDQSVVEKTIRPCLVELGEDPDVDVRYFSKEALQAIDQVMMST
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggtcgacgagccgttgtatccgatagcggtactaatcgacgagctaaagaac
gacgatattcagctacggttgaattccattaggaaactttctacaatcgcccgtgcgtta
ggagaggaacggacgcgaaaggagttgattcctttcttaagtgaaaacaatgacgacgat
gacgaggttctgcttgcaatggcggaagagttaggcgtgtttattccttacgttggcggg
ttggaatacgctcatgtgttgttacctcctttggaaacgctttgtatcgtcgaagaaacg
tgtgttagagataaagctgtcgagtcgttgtgtaggattgggtcgcagatgagagagacg
gatttggttgactggtttatacctcttgttaagaggttggcaggtggggagtggtttact
gcacgagtctctgcgtgtggattgtttcacattgcttatcctagtgcttcagagatgttg
aaggcagaattgaggtcgatatatagtcagttatgtcaagacgatatgcctatggttagg
agatctgcttctacaaacttggggaagtttgctgctactgtggaaccgactcatcttaag
actgatgttatgcaaatattccaggatcttactcaggatgatcaagattctgttcgtttg
cttgctgtcgagggttgtgctgctcttggaaagttgctggaaccccaagactgtgttgca
catattcttccggtcattgtcagtttttcccaggacaagtcatggcgtgttcgctatatg
gtggctaatcagctgtatgagctatgtgaagctgttggcactgaacctaccaagacggac
ttggttccagcatatgttaggcttcttcgagataacgaagctgaagtgcgtatagcagct
gccggcaaggtcaccaaattctctcgcatacttagcccagaacttgcaattcagcatatt
cttccatgtgtcaaggagttgtcttcggattcttctcagcatgttaggtctgctctagcc
tccgttataatgggcatggccccagttttaggcaaggatgcaaccattgaacaacttctc
cctatatttctgtcacttctaaaagacgagtttccagacgtgcgcctcaatattatcagt
aagctagatcaagtgaatcaggtgatagggatcgatcttttgtctcaatccttgttgcca
gcaattgtggaactggcagaggacaggcattggagggttcgattggctataatagaatac
atacctctgttggctagtcagttgggtgtaggctttttcgatgataagcttggtgctctc
tgcatgcaatggttacaggacaaggtttattctatcagagaagctgctgctaacaacctg
aagcggctggcagaggaatttggtccagattgggcaatgcaacacattgttccacaggtg
ctggaaatggtgaacaacccacattacttgtatcgcatgaccattcttagtgcaatttct
ctacttgctcctgttttgggctcagaaatcacttgctctaagctgcttcccgtggtggtt
gttctagccaaggacagagtagcaaatatcagatttaatgtggcgaaggtcttgcaatct
tttattcctatcgttgaccaatctgtggttgaaaaaacgatacgcccctgcctggtcgag
ctaggggaagatccggatgttgatgtccgttacttctccaaggaagcacttcaggctatc
gatcaagttatgatgtctacatag
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