Erigeron canadensis (horseweed): 122598801
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Entry
122598801 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122598801
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122598801
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122598801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-RING_13
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
122598801
NCBI-ProteinID:
XP_043627220
LinkDB
All DBs
Position
5:complement(19619069..19624232)
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AA seq
315 aa
AA seq
DB search
MNRNPIFQVRKRKWKTVLFLLRKRKRRILINPSSFSFNDDDFAKQQQQQEPKFVENDGDF
YDSFDGDNDDRDYVENHEEENAIFSDSGGLDENEEDVGDGEKAEVDIDKSAVASLVVVSK
DREKDGGETPPDDDCCPICFENFNVASKTNCGHWFCANCILQYWTYRTVLQKCNCPICAR
PISKLMPEASLFIMQEAEVVEVLKNVQRYNRLFQGGINGVIRKVFEVPNVFKSMLCGLMD
PDRFRGNYYAMRSLALMMSCIYNVSSFDFIPTGTLGVRRLFDLCAIALVVILCLVGIFHR
LVLRRRVRRLAANQL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaaccctattttccaggttaggaaaaggaagtggaaaaccgtcttgtttttg
ctccggaagcgaaaacgaaggattctgataaacccttcttccttttctttcaatgatgac
gattttgctaaacaacaacaacaacaagagcctaaatttgttgaaaatgatggtgatttt
tatgatagttttgatggtgataatgatgatagagattatgttgaaaatcacgaggaagaa
aatgctatttttagtgattcaggaggattagatgagaatgaggaggacgtaggagatgga
gagaaagcggaagtggatatcgataagtctgcggtggcgtcgttagttgtcgtttcaaag
gatagggaaaaggatgggggagaaacgcctcctgatgatgattgctgtcctatttgtttc
gagaatttcaacgttgcttctaaaactaattgtgggcattggttttgtgcaaattgtata
ttacaatactggacctatagaactgttcttcaaaaatgcaactgcccaatttgtgcacgt
ccaattagtaagttgatgccagaggcatctttattcattatgcaggaagctgaagttgtt
gaggtcctaaagaacgtgcagaggtataaccgccttttccagggtggtataaatggtgtc
atacggaaagttttcgaggttccaaatgtattcaaaagcatgttatgtggtctgatggat
ccagatagatttaggggaaactactatgctatgcgttccttggccttgatgatgagttgc
atttataacgtgagttcttttgacttcattccaacaggcactttgggggtgaggcggttg
tttgatctttgtgctatagcactagtggtaattctgtgtttggttggcatcttccacaga
ttggtactcagacgacgtgtcaggcgattggcagctaaccaattatga
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