Erigeron canadensis (horseweed): 122598835
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Entry
122598835 CDS
T07610
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 1-like
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122598835
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecad01007
]
122598835
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122598835
Enzymes [BR:
ecad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
122598835
Amino acid related enzymes [BR:
ecad01007
]
Aminoacyl-tRNA synthetase
Class II (A)
122598835
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122598835
Prokaryotic type
122598835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
WHEP-TRS
tRNA-synt_2d
BRCT_TopB1_SLF1
Desulfoferrodox
Motif
Other DBs
NCBI-GeneID:
122598835
NCBI-ProteinID:
XP_043627255
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All DBs
Position
5:34628424..34631270
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AA seq
555 aa
AA seq
DB search
MAVAESEFSERVLIRSILTRPDGGASLAGQTIKVGGWVKTGRKTGSVKEGKDQLPFAFVE
LNDGSCSANLQLMIYSDVASLDEVTRTGTSMHVEGVLQTPPVQTKQSIELKVSKVIHVGS
SADEDPTKKYPFQKTYYPLEYLRDYLHLRPRTATISAIARIRSALAYATHTFFQKHGFLY
VHTPIITTIDCEGAGEMFQVTTLINEAEKELTKSTSQEDVDVAKGVVKEKGEIIAKLKAD
KAEKPAITAAVAELTKAKGNLAKIEERFNMKPGIPKKYGKVDYGQDFFARQAFLTVSGQL
QAETFACALGSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADIEGDMKCAEAYVRFLC
QWLLDNCLDDMEFMVNKFDKNAIKRLQMVASTNFVRLTYTEAVTILEEAVSKGHKFERKV
EWGIDLASEHEKYLTEKKFESPVIVYNYPKGIKAFYMKLNPDKKTVAAMDVLVPKVGELI
GGSQREENYEVLKERMLEMGLPLEPYEWYLDLRRYGTVKHSGFGLGFERMILFATGIDNI
RDVIPFPRVPGKADL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggcagaatcggagttctcggaacgtgtcctaatccgatcaatcttaacccga
cctgatggcggtgccagtttggcaggacaaaccataaaagttggtggctgggtgaaaaca
gggagaaaaacagggagcgtaaaagaaggcaaagatcagttaccattcgctttcgttgaa
cttaacgacggatcatgttctgcaaacttgcaactgatgatctattccgacgttgcgtcg
ttagatgaagttactcgaaccggcacgtccatgcacgtggaaggcgtacttcaaacgcct
cctgttcagaccaaacagtctattgaacttaaggtttccaaagtgattcatgtcggatct
tctgctgatgaagatccgacgaaaaagtatccttttcagaaaacatactatcctcttgag
tatcttagggattatcttcatcttcgacctagaactgctactatttctgcgattgcacgt
attcgtagtgcattggcgtatgcaactcacacgttttttcaaaaacatgggtttttgtat
gtgcacactccgattatcacaactattgattgtgaaggtgctggagagatgtttcaagtg
acgactttgattaatgaagcggaaaaggaattgactaaaagtacgtctcaagaagatgtg
gatgtagccaaaggtgttgtgaaagaaaaaggtgagataattgcgaaattgaaggctgat
aaagctgagaagcctgcgataacagctgcggttgcagaactcactaaggcgaaagggaat
cttgcaaagattgaagagaggtttaacatgaaacctggtattccaaagaagtatgggaag
gttgactatggtcaagatttctttgctcgtcaggcgtttttaactgtttcgggccaactt
caggccgagacttttgcttgtgcacttggcagcgtttacacttttgggccaacttttaga
gctgaacattctcatacgtcacgccatcttgcagagttctggatggttgagcccgagata
gcatttgcagatattgagggtgatatgaagtgtgcagaggcatatgttaggtttctgtgc
caatggttacttgacaactgtcttgatgatatggaatttatggttaacaagtttgataag
aatgctatcaaacggctacaaatggttgcttcaacaaactttgtacgcctgacatacacc
gaagcagtgacaattcttgaggaggctgtttctaaagggcataagtttgagagaaaagta
gaatgggggattgatttggcatctgaacatgaaaagtatctgacggagaagaaatttgaa
tctcctgtgattgtatacaactatcctaaagggataaaagcattttacatgaaactcaac
cctgacaagaaaacagtagctgctatggatgttcttgttcctaaggttggtgaactaatt
ggaggaagccaaagagaagagaattacgaggttctcaaagaaaggatgcttgaaatgggg
ttgccacttgagccgtatgagtggtaccttgatctgcgtcgttatggaaccgtaaagcac
agtgggtttggtcttggatttgagaggatgatactttttgcaacaggaattgataatatt
agagatgtaattcccttcccaagggttccaggcaaagcagatctttga
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