Erigeron canadensis (horseweed): 122599015
Help
Entry
122599015 CDS
T07610
Name
(RefSeq) TBC1 domain family member 5-like
KO
K18469
TBC1 domain family member 5
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122599015
Membrane trafficking [BR:
ecad04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122599015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
122599015
NCBI-ProteinID:
XP_043627397
LinkDB
All DBs
Position
5:complement(7209313..7214548)
Genome browser
AA seq
811 aa
AA seq
DB search
MIPENSVATEELPERRFWDLRGVQWRTDLGVLPENSGVDEVRRVTANSRRRYAAIRRKLL
IDPPVPKDGNNFADLAMDNPLSQDPDSMWGRFFQKAELEKMVDQDLSRLYPEHGSYFQTP
GCQGMLRRILLLWCIRHPNYGYRQGMHELLAPLLYVLQADVERLSAVRKLYAHYFTDNFD
GFSFYETDSAYKSNLKQLSQHIEDDNEIQENQVKFCNPNELDPKIQTIISFSDAYGAEGE
LGIVLSEKFMEHDAYCMFDALMNGSGGVVSMASFFSPNPLNGPQNGLPPVIEASSELYHL
LAIVDSSLYTHFIELGVEPQYFALRWLRVLFGREFALEDLLVIWDEIFSFGNIKLNTVSE
NDSDITFGVLNSPRGAFIASLAVSMILYIRSSILATETATSCLQRLLNFPQDVNLGKLLK
KANSLMTVAIDAMRSAPRRVASDGVHERAKLKGFRGHSLSSDAAALGSPLSSVRDSYWEE
KWRVLHKEEKQKQMNPQKKSQSQLKGWSEKVKSRLLRTESDPSSSKAFREKTSTSRPQVR
RKLLDDLSRQLGLEEEIENEKAVSGNGGSEESSSIFSGPSSPIRADAATDNDHENDTDQS
SVASNLIVDESDLDPEPEPEPKPCIAVEASIACTAVEASITCTSVDSSSDIQEVDENKHN
LVSDPPEDAPLKAVENQDSIGKSGSNLKDRILSSGKFQWFWKFGKNGVDGSFESTNCSMV
GRDQKSEVPPSTKDVTSKGESVNQNKTYSLKNLGQSMVENLQVIESVFQQEKYEAGHVDS
SSKKALVDRGQMTATAALKELRKISNILSEM
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgattccggaaaattcagtagcgacggaagagttgccggagagaaggttttgggattta
agaggagtacagtggcgtactgatttaggagttttgccggaaaattctggagttgatgaa
gttcgccgtgttactgctaattctcgccggaggtatgctgcaataaggaggaagcttctc
attgatcctcctgtcccgaaagatggaaacaattttgctgatcttgctatggacaatccg
ttatcacaagacccggatagcatgtggggtcggtttttccaaaaagccgagttagagaaa
atggttgaccaagatttgtcacgattgtatcctgaacatggtagctacttccagactccc
ggatgccaaggcatgttaagacgaattttgttgctttggtgtattagacatccaaattac
gggtacagacaaggaatgcatgaactcttggctccattattgtacgttcttcaggcagat
gtagagcgcctttctgctgtgcgaaaattatatgcacattacttcactgataattttgac
ggattctcattttacgagactgattcagcttataaatctaacttgaaacagctgtctcaa
catatagaagatgataacgaaatccaagagaatcaagttaagttttgtaaccctaatgaa
cttgatcccaagatacaaaccatcatttcatttagtgatgcttatggggccgagggcgaa
ttgggtattgttttatctgaaaaattcatggaacatgatgcttattgtatgtttgatgca
ttgatgaatggttctggtggcgtggtctcaatggcaagctttttctcccctaatccatta
aatgggccacaaaacggtttgccacctgtaatagaagcatcttccgagctataccacttg
cttgcaatcgtcgattcgtctctttacactcattttattgagcttggagttgaaccgcaa
tattttgctcttcgatggttacgggttctttttgggcgtgagtttgctcttgaggacctt
ttggtaatatgggatgaaatattttcatttggcaacattaaactaaatacagtttccgaa
aatgactctgatatcacctttggggtgcttaattcgcctcgaggggctttcattgcatcc
cttgccgtttcaatgattctttatatacgatcatctattcttgccactgaaaccgccact
tcatgcctccaaagattattaaacttcccgcaggatgtgaatttgggcaaactgttaaag
aaagctaattctctaatgacggttgctattgatgctatgagatcggccccacgtcgagta
gctagtgatggggttcatgagcgggccaaattgaagggcttcagaggtcacagtctgtca
tctgatgcagctgctttgggaagccctttaagctcagtgcgtgatagctactgggaagag
aaatggagggtgttgcataaagaagaaaaacaaaagcaaatgaacccacaaaagaaaagt
caaagtcaactcaaaggttggtcggaaaaagttaagtcacggttattgcgaacggaatct
gacccatcttcttcaaaagcgtttcgtgaaaaaacgagcacttccagaccacaggttagg
agaaagttgctggatgatttatcccgacagcttggtctagaagaagaaatcgagaatgaa
aaagccgtgagtggaaatggtggcagtgaagagagctcatctattttctctggtccttct
agtcctatacgtgctgatgctgctactgataatgaccatgaaaatgacactgatcaaagt
agtgtagcttcaaatttaatagttgatgaaagcgatctggaccctgagcccgaacctgaa
cccaagccttgtattgcagtggaggcgtctattgcttgtactgcagtggaggcgtctatt
acttgtacttcagtggattcatctagtgatattcaggaagtggatgaaaacaagcacaat
ctggtttctgatccccctgaagatgcacctttgaaggcagtggagaatcaagactctata
gggaagtccggatctaatttgaaagacaggatactttcctcgggaaagtttcagtggttt
tggaagtttggaaaaaacggggttgatggttcttttgagtcaacaaactgttctatggtg
ggccgtgatcagaaaagtgaagtgccgccttctacaaaggatgtgacaagcaaaggagaa
tccgtgaaccaaaataagacgtattctttgaagaatcttggccaatctatggttgaaaat
cttcaggtaattgaatcagtattccagcaagaaaagtatgaagcagggcatgtagatagc
tcgtcaaaaaaggcgctggtagacagaggtcaaatgacggccaccgcagctctaaaagag
cttcgtaagattagcaatattctatcagaaatgtga
DBGET
integrated database retrieval system