Erigeron canadensis (horseweed): 122599027
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Entry
122599027 CDS
T07610
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 14
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecad01002
]
122599027
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122599027
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122599027
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122599027
Peptidases and inhibitors [BR:
ecad01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122599027
Ubiquitin system [BR:
ecad04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122599027
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122599027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_DHX29
UBA_4
Motif
Other DBs
NCBI-GeneID:
122599027
NCBI-ProteinID:
XP_043627406
LinkDB
All DBs
Position
5:complement(31606975..31613836)
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AA seq
803 aa
AA seq
DB search
MEMELLRSNLSRVRIPEPTNRIYKQECCISFETPKSEGGLFVDMNTFLAFGKDYVGWNFE
KTGDPVYLHIKHTKKPIPEDRPLKKPTLLAIGIDGGFDNQEPEYDETFSIVILPDYATLP
FPSVALPEKVRLAVDAVIIAEGAERKEQVASWTADTKQVSEHALTLKQIDNGVKIPPSGW
KCAKCDKTDNLWLNLTDGMILCGRKLWDGTGGNNHAIEHYNETRYPLAVKLGTITSDLEG
ADVFSYPEDDSVTDPYLADHLAFFGIDFSSLQKTEMTTAEKELDQNTNFDWNRIQESGQE
VEPLFGPGYTGLINLGNSCYLAATMQVIFSTHSFSSRYYKNQSLKTAFSIAPADPTVDLN
MQLTKLANGLLSGKYSVPAVKNDDVANAVDPSLRAKQEGIRPRMFKAVIAASHPEFSTMR
QQDALEFFLHLIDQVERVNASNPESDPARSFKFGIEERLQCPSGKVAYNKRNDYILSLNI
PLEKATNRKELEEFHKLKAQKEAEGKELSSDEIVRPRVPLSDCLNSFSHPEEVQGFYSTA
LNARTTAIKTAGLTSFPDYLVLHMRKFVMEAGWVPKKLDVYIDVDDIIDISHMRSKGLQP
GEELLPEDAPGAQEESAKLLPNEDIVSQLASMGFNHLHCQKAAINTSNAGVEEAMNWLLS
HMDDPDIDAPIHKETKNEVDPSKVSTLMSFGFEEEIARKALKASGGDIEKATDWIFNPPA
ASGPTDMDASSSATVDATLPDGNGKYRLIGLVSHIGTSTQCGHYVAHVYKEGRWVIFNDD
KVGVSKDPPKDMAYLYFYERIQS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaactgctgcgttcgaatctgtccagggttcggattccggaacctacaaat
cgcatttataagcaggaatgctgtatcagcttcgaaactccgaaatccgaaggtggattg
tttgtggacatgaacacgtttcttgcctttgggaaggattatgttggttggaattttgag
aagactggtgacccagtttacttgcatattaaacatacaaagaagccaattcccgaagat
agacctctaaagaaacctactctcttggctattggtattgatgggggatttgataatcaa
gaacctgaatatgatgaaactttcagcatagtaattctgccagattatgcgactcttcct
tttccatcagtggctttacctgagaaggtacgattggcagttgatgcagttataattgca
gagggtgctgaacggaaggagcaagttgcatcttggacagctgatacgaagcaagttagt
gaacatgcattgaccttgaaacagatagataatggtgtaaaaattcctccatctggatgg
aaatgtgccaagtgtgacaagactgacaatctgtggttgaatttaactgatggaatgatc
ctctgtgggcggaaactttgggatgggactggtggtaataaccatgccatcgaacattat
aatgagactcgttatcctcttgctgtaaagcttgggacaataacttctgatctggaagga
gcagatgttttttcttatccggaggatgacagtgtgactgatccttatctggcggatcat
ctggcattttttggtattgatttttcctccttgcaaaagacagaaatgacaacagccgaa
aaggagcttgaccaaaatactaactttgactggaatcggattcaagagagtggacaggaa
gttgaaccactttttggacccggatatactggactaattaatcttggcaacagttgttat
ctggctgcaaccatgcaagttatcttctcaactcattcgttttcttcgcggtactacaag
aaccaaagtttgaaaacggcttttagtattgctccagctgatccaactgtagaccttaat
atgcaattaacaaaacttgctaatggtcttctttctggtaaatattctgttccggcagtg
aagaatgacgatgtggcaaatgccgtagacccgtctttaagagctaaacaagaaggaatt
cgtcccaggatgtttaaggcggtaattgcagccagccatcccgagttttcgaccatgcgt
cagcaggatgctctggaattctttttacatttgattgaccaagttgagcgagttaatgcc
agtaatcctgaatcagatccagctaggagtttcaagtttggaattgaagagcgccttcag
tgtccttcaggaaaggttgcttacaataaaagaaatgactatattctttcgttgaatatt
ccacttgagaaggctactaacagaaaggagctagaagagttccacaaattgaaggcacaa
aaagaggcagaggggaaggaactgtcttctgatgaaattgtacgtccgagggtgccgcta
agtgattgtctaaatagcttttctcatccggaggaggtgcaaggtttctatagcactgct
ttaaatgctagaacaactgcaatcaagactgcaggcctgacatcattccctgattatttg
gtactgcatatgagaaaatttgttatggaagctggttgggtgccaaagaagcttgatgtc
tatatagatgttgatgatatcattgacattagtcacatgcgaagcaaaggtcttcagcca
ggtgaagagttgttgcctgaagatgctcctggagcccaggaagagtcggcaaagcttcta
cctaatgaagatattgtatcccaactagcttcgatgggatttaaccatctccattgtcaa
aaggctgcaatcaacacctcaaatgctggggtggaagaggcaatgaactggttactttct
cacatggacgatccagacattgatgctcccattcataaagagactaaaaacgaggttgat
ccatctaaagtttctacgctgatgtcctttggttttgaagaagaaatagctcgaaaggca
ttgaaggcttctggtggcgacatcgagaaagcaacggactggatctttaacccccctgct
gcatctgggcccacagatatggatgcatccagcagtgctactgttgatgccacattacct
gatgggaatggaaaatatcgactgattggactggtgagccacattggcacgtccacacaa
tgtgggcactatgtagctcatgtatacaaagaaggaaggtgggttattttcaatgatgat
aaagtgggtgtttctaaagacccaccgaaagacatggcttacctctacttctatgagagg
attcaaagttga
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