Erigeron canadensis (horseweed): 122599079
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Entry
122599079 CDS
T07610
Name
(RefSeq) autophagy-related protein 2 isoform X1
KO
K17906
autophagy-related protein 2
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122599079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122599079
03029 Mitochondrial biogenesis [BR:
ecad03029
]
122599079
Membrane trafficking [BR:
ecad04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
122599079
Mitochondrial biogenesis [BR:
ecad03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122599079
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
122599079
NCBI-ProteinID:
XP_043627469
LinkDB
All DBs
Position
5:complement(27124911..27133087)
Genome browser
AA seq
1820 aa
AA seq
DB search
MFSWNFAKSAEAMFSRLAVKKICKFLLKKKLGQIILGDIDVNQLDVQLSSGIIQLSDLAL
NVDFINQKFGEEAILVVKEGSIGSLTVRLPWKNRNCEIELEELEVVLALGRKESGRFATE
ASISGQDGNTYNSYDFMAHENEMGNSTITGASVDIHEGVKTIAKMVKWLLTSFHVRIKKL
IVALDPSAEDMEGKGDCRTLVVRFGEVECGTGVSEDVNLNSEGAVDGFLGLSRLTNFVKF
DGAILEFLRLDGDGETWGEMFSGCCSVNATTPVITGEKGGFSGTIKLSIPWKNGSLDIRK
LDADVYVDPLEIRFQPSSLKNFMYFMHVFEELNKDRNSYMHSKASESVYHSVSSSHGYSS
TSSSFGLYSQKPVAFSPESHSSAGSDSVLDALLRSSHLISDWMASPITSNQELKTEESEF
GASVDQFFECFDELRASQSALGNSGMWNWTCSVFSAITAASNLASGSLNIPPEQKHVETS
LKATITQIVILFSFVDEDKQDEASYVHYINADFRDMQLLLQVCPQESNFEATVKHIEVSD
YFSLPSQNQSANDQSLLIRKKQAAVEKACPPLTPLAGRSRYYRDHIYRDDVVKVLLLKTY
AVTRCQYTVPSVTGPRSFSLNLPSLIFWVNLDLISTVLDLMKDIENSLKIYGLKDIVAKG
PSPQFMTSHKETLRCNISLLDARIVFCFPCEKSQDCKSYLSWNQFIVIDLSSPSTLRDRR
VQSSQRFRVTTSRSLHLSVGNIVVYFVESDYQLKCYAERVLSASDKEGHPSVISMLWQDN
AVTGPWITKRVKILANSDHNTGRNKSTGKGHGFAYVTTTKDMEDFNSRTREELVSTSSFF
LHVHVAPTTIDLDSSLYQTLHDHLHHMTDWLSCIASEKHPSSSQSSILLECDYVEVSVCV
APAENIKGSIQNELPGSWGKLKLKVTKFELLTVSNTGGSLDASFLWVGHGEGNLRGSTTG
VPDDEFVLISCDNSTRGRGNGEGSNVLSSRFPGSDIIHMWDPENIVSQVSINIRCATVVA
VGGRLDWFDTIISFFSHISSESNQVNDDVLEKEDSSFVLNLIDIALSYEPYSSNAEAEPG
SSQEQCVAGLLAASGLKLSKFSSANCVENDYEIKAHDLGVLLCEEFGLRNLHGSYSDQNL
RQIGYVKVAEETHVEAVLRMNCKNGHEWELECSESHVVLDTCQDTTFGLARLAAQIQQIY
APDFEEAIVHLQSRWDNIQVALEGYKSRSSSNYSTSSNSDTNGDIYTANLMDEISEGAFN
LDAHHERVSGPFFGLEDNETSCSHATLPELIDGYFLSDMRLLPESSSNYRPQSTKSATPK
EVGAQVENGWYGDSLLNIVEDHVLGIAEKTDSRQVIGTKPSVTQTGNVNVKGCVVLKNLN
VRWTLYAGSDWQYTRDKAVCLEFALLKMGLLCDIFPDGETYVSKLSVSIQDFSINDVSKG
APWIQVLGCYQSKDRPRESRSKAFKLDLESVRPHPSTPLEEYRLKVAILPMRLHLHQSQL
EFLISFFGGKNMSPDHVQDIIELELPQKSYTSLGGCRIIEEALLPYFQKFSISSFVVRVD
YIPSRVDVAALGHGKYAELVNLFQWKGVELKLKHVQAVGVYGWSSVCETIIGEWLEDISQ
NQIHKLLKGLPPIRSLVAVGSSAAKLVSLPVKNYKKDRKIVKGMQRGTIAFLRSVSLEAI
GLGAHITAGAHAILLQAEDIISTSPPTSPLQNRGSSNARPGQPKDARQGIQQAFETITDG
FGKSASALVQTPLKKYQRGAGVGSALYTAVQAAPGAAIAPASAAARAVHSALIGVRNSLD
PEHKKDSMDKYLGSNRPQPR
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgttttcttggaattttgcaaaatctgcagaggccatgttttcaagattggctgtaaaa
aagatttgcaagtttttattgaagaaaaaattagggcaaattatattgggggatattgat
gttaatcagcttgatgttcaattaagtagtggcataattcagctttctgatttagcactt
aatgttgattttattaatcaaaagtttggtgaagaagctatcttggttgtgaaagaaggg
tcgattgggtctttaaccgttagacttccatggaagaatagaaactgtgaaattgagttg
gaagaactcgaggttgtacttgcccttggtcgaaaagaaagtggtcgatttgcaactgaa
gcttctatttcaggtcaagatgggaatacgtataatagttatgactttatggcacatgaa
aatgaaatgggtaacagtactataacgggcgcttctgtggatattcatgaaggagtgaaa
actattgccaagatggttaaatggttgcttacaagtttccatgtgagaatcaaaaagtta
atagttgctcttgatccgtctgcagaagatatggagggaaaaggggactgcaggacgttg
gttgtgagatttggtgaagtggaatgtggtacgggagtttctgaagatgttaaccttaat
agtgaaggggcggttgatggttttcttgggctgagtaggttgactaattttgtgaagttt
gatggagcaatacttgagtttcttcggttagatggtgatggagaaacttggggtgaaatg
ttttcaggatgttgttcagtcaatgcgactacaccagtcattacaggagaaaaaggtgga
ttttcgggtaccataaagctgagtataccatggaaaaatggctctctagatatcagaaaa
cttgatgctgatgtatatgtcgatcctttagaaataagattccaacctagctcattgaaa
aatttcatgtattttatgcatgtttttgaggaacttaacaaagaccgcaatagttatatg
catagtaaagcaagtgaatctgtataccacagtgtatcatcatcccatggttattcatca
acttcaagttcttttggtctttattctcagaaacctgtagcattttcacctgaatcacat
tcttcagctggaagtgattcggtcttggatgctttgttacgtagttcacatctaatatca
gactggatggcatcacccatcaccagcaaccaggaactaaaaactgaagaatcagaattt
ggggccagtgtcgatcaattctttgagtgttttgatgaattaagagcttcacaatctgca
ttggggaatagtgggatgtggaactggacatgctctgtgtttagtgcaataactgctgca
tccaaccttgcttcaggatctcttaatattccacctgaacagaaacatgttgaaacaagt
ctcaaggcaacaattacacagattgtaatcctattttcctttgtggatgaagacaagcaa
gatgaggcttcatatgtccattatataaacgcagattttcgtgacatgcagctgcttttg
caggtctgccctcaagaatcaaactttgaagcaacagtcaaacatattgaggtgtctgat
tatttcagtctaccatctcaaaatcaaagtgcgaatgatcagagtttgttgattagaaag
aagcaagctgcagttgaaaaggcttgccctcctttgacgccactggctggccgttcgaga
tactatagggatcacatctatagggatgatgtggtcaaagtcttgctgctcaaaacttat
gccgttacacgatgccaatacactgtgccttctgttacaggccccagatccttttctttg
aatctgccatctttaattttctgggtgaatcttgatttgataagcacagtgttggatctt
atgaaagatatcgagaactcccttaaaatatatggtttaaaagacatcgttgcaaagggt
ccgagtcctcaatttatgacttcacataaggaaactctgagatgcaatatttcgcttctc
gatgcaagaattgttttttgttttccttgtgagaaaagtcaagattgtaagagctactta
tcctggaatcagtttattgttattgatctttcttctccatctactttaagagacaggcgg
gttcagtcaagtcagagatttcgtgtgacaacctcacggtcgttgcatttaagtgtgggt
aacattgtggtctactttgttgaatcagattatcagctcaaatgttatgcagaacgtgtc
ttgtctgcatctgataaagagggccatccatctgttataagtatgttgtggcaggataat
gctgttacgggtccttggatcacaaagagagtgaagattcttgctaattcagatcataac
accggccggaataaatctacagggaaaggccacgggtttgcatatgtaactaccactaaa
gatatggaagatttcaattctcgaacacgagaggagttggtttcaacctcttcattcttc
cttcatgtccatgttgcccctactactatcgatctggacagttcgttatatcaaacctta
catgatcatttacatcatatgactgattggttgtcatgcatagcttctgaaaaacatccc
tcgtcatctcagtcatctatcctattagaatgtgattatgtggaggtttctgtttgtgta
gcaccagcggaaaacatcaaagggtcgatccagaatgagcttcctggctcttggggtaaa
ttgaaattaaaagttaccaaatttgagttgttaactgtatcaaatactggtggaagcctg
gatgccagttttctctgggtaggccatggtgagggaaatctacgcggttccactacaggt
gttcctgatgatgagtttgttcttatatcttgtgataactccaccaggggacgcgggaat
ggtgaaggctcaaatgtactttcttctaggtttcccgggtctgatatcatacacatgtgg
gacccagagaatattgtaagtcaagtatcaataaatattaggtgtgccactgtcgttgca
gtaggtgggcgtttagattggttcgatacaattatatcatttttcagtcatatttcaagt
gaaagtaaccaagtaaatgatgatgttttagaaaaagaagactcttcgtttgtgcttaac
ttgattgatattgctttgagttatgaaccttactcaagtaatgcggaagccgaaccaggt
tcttctcaagaacagtgtgttgctggtcttctagcagcatctggtttgaaactctcaaag
ttttcatcagctaattgtgtagagaacgattatgaaatcaaagctcatgatttgggagta
ttgctttgtgaagagtttgggctcaggaatcttcatggatcttacagtgatcaaaatcta
cgacagattgggtatgttaaagttgcagaagaaacacatgttgaagcggtcttaagaatg
aattgcaagaacggccacgaatgggaattagaatgctctgaatcccacgttgtgctggat
acttgccaagataccacctttggactcgctcgtcttgcagctcagattcagcaaatatat
gcccctgattttgaagaagcaattgtgcatttacagagtcggtgggataatatccaggtg
gcactagaaggttacaaaagccgaagctcaagcaattattcaacttcgtctaattcagat
acaaacggggacatttatacagccaacttgatggacgaaatttctgaaggagcattcaac
ttagatgctcatcatgaacgtgtgtccggtccgttttttgggttggaagacaatgaaaca
tcgtgctcacatgctaccttgcccgagctcatagacggctacttcttatctgacatgcgc
cttctacctgaatcctcttcaaactatcgaccacagagcaccaaatcagcaactccaaag
gaggtgggggctcaagttgaaaatggatggtatggcgattcactgttaaatattgtagaa
gaccatgttttgggtattgcggaaaaaaccgattccagacaagtcattggaaccaagcct
tctgtcacacagacggggaatgtgaatgttaagggttgtgtggttctgaaaaatcttaat
gtaaggtggacactgtatgcaggttctgactggcagtatacaagggataaagctgtttgt
ttagaattcgcactgttgaagatgggtctcctgtgtgacatattccctgatggtgaaaca
tatgtgtctaaactttcggtgtcaattcaggatttttctatcaatgatgtcagcaagggt
gcaccctggatacaggttcttggttgttatcaatcaaaagatcgtcctagagaatcccgt
tctaaagcattcaagctagatttagaatccgttagaccgcatccctcaactcctctggag
gaataccggctaaaagttgcaatacttcctatgcgtttgcatcttcatcaaagccaactt
gaattcctgatcagcttttttggaggaaaaaatatgtctcctgatcatgttcaggatatt
attgaattggagttaccacaaaagagctacaccagcctaggaggttgtaggataatagag
gaggcgttacttccctattttcagaagttcagcatatcatcttttgttgttcgggttgac
tacattccttctcgtgttgacgtagctgcattaggccacgggaaatatgctgagcttgtt
aatctttttcagtggaagggggtagagctaaaactgaaacatgttcaagctgtcggtgtt
tatggttggagtagtgtatgtgagacaataattggcgagtggttggaagatatttctcag
aaccagattcataaattactgaaaggtcttcctcccattcgatcactggttgccgttgga
tctagtgctgcaaagttagtgtcgctacctgtgaagaactacaagaaagatcgcaaaata
gtgaagggtatgcaaagaggtacaattgcattcttgaggagtgtctcacttgaggctatt
ggacttggagcacatattacagctggggcccatgctatcctccttcaagcagaagacatt
atttcaaccagtccaccgacctcgcctttacaaaacagagggagttctaatgccagacca
ggtcaacctaaagatgctcgccaaggaatacagcaggcttttgagaccatcactgatggt
tttggaaaatccgcatccgctttagtacaaactcccctgaaaaagtaccagcgcggggct
ggtgtagggtccgccttatatacagctgttcaggcggcacctggagcagctatagcaccc
gcttctgctgctgcacgtgcagtgcactctgcgcttattggcgtcagaaatagccttgat
cccgagcacaagaaagattcaatggataaatacttagggtcaaatcggcctcagccacgt
taa
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