Erigeron canadensis (horseweed): 122599138
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Entry
122599138 CDS
T07610
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00061
Fatty acid biosynthesis
ecad00071
Fatty acid degradation
ecad01100
Metabolic pathways
ecad01212
Fatty acid metabolism
ecad04146
Peroxisome
Module
ecad_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122599138
00071 Fatty acid degradation
122599138
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122599138
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ecad01004
]
122599138
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122599138
Enzymes [BR:
ecad01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122599138
Lipid biosynthesis proteins [BR:
ecad01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122599138
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of breast milk
122599138
Exosomal proteins of breast cancer cells
122599138
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
EhaL
PTEN_C2
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
122599138
NCBI-ProteinID:
XP_043627530
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All DBs
Position
5:39382152..39388942
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AA seq
661 aa
AA seq
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MTSSKRFIVEVEPAVEAKDGKPSLGPVYRSIYAKDGFPPPIPGQESCWDVFRMSVEKYPD
NRMLGTRHLVDGKHGPYVWLTYKQVYEKVIRVGNAIRACGVEPGSPCGIYGANCAEWVIA
MEACNAHGLYCVPLYDTLGAGAIEFIISHAEVKIAFVEEKKLPELLKTFPAAGEYLKTIV
SFGKVTPEQRKQVENLGLVIHSWEEFLSLGDDKNFDLPLKKKTDICTIMYTSGTTGDPKG
VLISNNCIVTMMAGVKRLLDSANESLNPNDVYLSFLPLAHIFDRLIEECFINNGASIGFW
RGDVKLLVEDIAELKPTIFCAVPRVLDRIYGGMQQKTAANNFIVRSIFNLAYSYKAHHMK
AGKKHSEASPLSDKIVFSKVKKALGGNVRIILSGAAPLASHVEAYLKVVACCHVLQGYGL
TETCAGSFVSLPNEMDMLGTVGPPVPNLDARLVSVPEMNYDALSSTPQGEVCIRGDVLFS
GYHKREDLTKEVLVDGWFHTGDIGEWQPNGSLKIIDRKKNIFKLSQGEYVAVENLENVFG
QVSDIDSVWIYGNSFESCLVAIVNPNKQAVEHFAEAHNISGDFESLCENPKVKEYILAEL
TRIGKDKKLKGFEFPKAVHLDPVPFDMERDLLTPTFKKKRPQMLKHYQNVIDNMYKTINK
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatcaaagaggttcatagttgaagttgaaccagcggttgaagctaaagacgga
aaaccatcacttggaccggtttacagaagtatctatgctaaagacggtttccctcctcct
attccgggccaagaatcttgctgggatgttttccgcatgtccgtggagaaataccccgat
aatcgaatgcttggcacccgtcatttggtggatggaaagcatggaccatatgtttggtta
acttacaaacaagtatatgagaaggtgattcgagttggaaatgctattcgtgcttgtggt
gttgagcctgggagcccgtgtgggatttatggtgccaattgtgcagaatgggttatcgca
atggaggcatgtaatgcgcatggattgtactgtgtacctttatatgatactttaggtgct
ggtgcaatagaatttattatctctcatgccgaggttaaaattgcttttgtggaagagaag
aaactccctgagctgttaaaaacatttcccgcagctggagagtacctgaaaacaattgtg
agcttcgggaaagttactcctgaacaaagaaaacaagttgaaaacttaggtttggtaata
cattcatgggaggagtttttgtcactgggtgatgacaaaaactttgacctgccattgaag
aagaaaacggacatctgtacaataatgtacactagtgggacaactggtgatcctaaaggt
gtcctgatatcaaataactgcattgtaacaatgatggctggtgtcaagcgtctgctagat
agtgcaaacgaatcattgaatccaaatgatgtctatctctcctttctacctctggctcac
atatttgatcggttgattgaagaatgtttcatcaataacggggcatctataggtttttgg
cgtggggatgttaaattgctggttgaagacatagcggagttgaaacctactattttctgt
gctgttcctcgagtccttgataggatttatggaggtatgcaacagaaaactgctgctaat
aattttatcgtacgtagcatatttaatctagcctattcatacaaggcacatcatatgaag
gcaggtaaaaagcattcagaggcatctccgttaagtgacaaaattgtcttcagtaaggtt
aaaaaagctctaggagggaatgtacgcatcattttatctggagctgctcctctagcttca
catgtagaagcttatttgaaagtagttgcatgttgtcacgttcttcaaggatatggtctg
acggagacttgtgctggatcatttgtctcgttgcctaatgaaatggatatgctgggtaca
gtgggaccacccgtaccaaatttggatgctcgattggtatctgttcctgaaatgaattat
gatgctctttcaagcacaccacagggagaagtatgcataagaggggatgttctattttct
gggtatcacaagcgtgaggaccttacaaaagaagtcctagttgatggctggttccataca
ggggatattggtgagtggcagccaaatggaagcctgaaaattattgaccgcaagaaaaac
attttcaagctttcgcaaggagaatacgtggcagttgaaaatctggagaatgtttttgga
caagtttccgacatcgactcggtatggatatatggaaacagctttgagtcttgtcttgta
gctattgttaacccaaataagcaagccgttgaacattttgcggaggcacataacatctct
ggggattttgaatcactatgcgaaaaccccaaggtcaaagaatacattttggcagagctc
actagaattggcaaagataaaaagttaaaaggctttgaattcccgaaagccgtccacctt
gaccctgttccttttgacatggaacgtgaccttctgaccccaacattcaagaagaaaagg
ccccaaatgctcaaacattaccagaatgtaattgataacatgtacaagactattaacaaa
aagtga
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