Erigeron canadensis (horseweed): 122599162
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Entry
122599162 CDS
T07610
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B-like
KO
K03064
26S proteasome regulatory subunit T4
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
122599162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ecad03051
]
122599162
Proteasome [BR:
ecad03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
122599162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_2
AAA_22
nSTAND3
PRS7_OB
DUF815
Prot_ATP_ID_OB_N
AAA_7
AAA_14
TIP49
AAA_33
Parvo_NS1
RNA_helicase
Mg_chelatase
AAA_18
AAA_28
AAA_3
NPHP3_N
AAA_25
TsaE
AAA_11
IstB_IS21
AAA_24
AAA_lid_PRS2_C
Sigma54_activat
NACHT
TPR_MLP1_2
bpMoxR
ABC_tran
ATPase
ATPase_2
NB-ARC
ResIII
PhoH
AAA_30
Motif
Other DBs
NCBI-GeneID:
122599162
NCBI-ProteinID:
XP_043627554
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All DBs
Position
5:complement(28343375..28348310)
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AA seq
399 aa
AA seq
DB search
MTNEGEDAVRRRTAETEYRKKMLQHKELDSRVRAVRETLRSTKKEYAKTEDDLKSLQSVG
QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPRE
VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFSYARDHQPCIIFMDE
IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR
LDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA
IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacgaaggtgaagatgcagtccgccgccgtactgcggagacggagtaccggaaa
aaaatgcttcagcataaagagcttgattcacgagtccgtgcagtgagagagacattgcgg
agtacaaaaaaggaatatgccaaaacagaagatgatttgaagtcccttcaaagtgttgga
cagatcattggagaagtgctaagacctttggacaatgaacgattgatagttaaagccagc
agcggtccgaggtatgtcgttggatgtcgcagcaaagtggacaaggaaaaactgactgct
ggaactagagtggttcttgacatgaccactttgacaattatgcgagcactcccccgtgaa
gttgatccagttgtgtataatatgcttcatgaagatcctgggaacgttagctactctgca
gttggtggtctgtcagatcagattcgggagcttagggaatctatagagttgcctctgatg
aatcctgagcttttcttaagggtgggcattaagccacctaagggtgttcttctctatgga
cctcctggtactggcaaaacattactggctagagcaattgctagcaatatagatgctaac
ttcttgaaggttgtgtccagtgccattattgacaagtacattggtgagagtgcaagattg
atcagggaaatgtttagctatgctcgtgatcaccaaccctgcatcatatttatggatgag
atcgatgccattggtgggcgccgttttagtgagggaactagtgctgaccgtgaaattcaa
agaacactcatggagctactcaatcagcttgatggatttgatcagctcggaaaggtaaaa
atgataatggcaacaaacagacctgatgttctcgatcctgctcttcttcgtcccggtcgg
ctagataggaaaatagagattccattgccgaatgaacagtcgagaatggaaattctcaaa
atccatgctgctggaattgctaaacatggtgaaattgattacgaggcagttgtcaaactt
gcagaggggtttaatggagccgatctccgtaatgtgtgcactgaagctggtatgtctgca
atccgtgcagaacgggattatgttattcatgaagatttcatgaaggctgtgcggaaactt
aatgaagcaaagaagcttgagtcaagtgctcattacaatgctgattttggcaaagattaa
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