Erigeron canadensis (horseweed): 122599189
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Entry
122599189 CDS
T07610
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122599189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122599189
Membrane trafficking [BR:
ecad04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
122599189
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
AcrIIA4
Peptidase_M61
Motif
Other DBs
NCBI-GeneID:
122599189
NCBI-ProteinID:
XP_043627586
LinkDB
All DBs
Position
5:complement(43245203..43249615)
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AA seq
207 aa
AA seq
DB search
MKITALLVLKCNPEGSSSSSSSSSDPIILANSSDVNHFGFFQRSSAREFIVFVGRTVAKR
TPPSQRQSVQHEDYKVHSYNRNGLCALGFMDDHYPVRSAFSLLNQVLDEYQKKFGDSWKS
VQADSNQPWPYLDEALTRFQDPAQADKLLKIQRELDETKIILHKTIDSVLERGEKLDSLV
AKSSDLSTASQMFYKQAKKTNQCCTIL
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgaagataacagctttgctagttcttaaatgcaacccggaaggttcttcatcgtcgtcg
tcgtcatcttctgatccaatcatattagctaactcaagtgacgtcaaccattttggtttc
tttcaaagatcgagtgccagagaattcattgttttcgttggccgtaccgtcgctaaacgc
actcctccttctcaacgtcaatctgttcaacacgaagattataaggtgcattcatataat
agaaacggtctttgtgctttgggatttatggatgatcattatcctgttcgcagtgcgttt
tctcttttaaaccaagtgttagatgaataccaaaagaaatttggtgattcatggaaatct
gtgcaagctgattccaatcaaccatggccttatttagatgaagctttgaccagatttcag
gatcctgcccaggcagacaagctgctgaaaattcaaagggagttagatgaaacaaaaatt
atactgcacaagactatcgatagtgtccttgaaagaggtgaaaagctggacagtttagtt
gcgaaaagttcagacctcagtacagcttcacagatgttctacaaacaggcaaagaaaacg
aaccaatgctgcacgatattgtaa
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