Erigeron canadensis (horseweed): 122599226
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Entry
122599226 CDS
T07610
Name
(RefSeq) elongation factor 1-alpha-like isoform X1
KO
K03231
elongation factor 1-alpha
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122599226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122599226
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122599226
03012 Translation factors [BR:
ecad03012
]
122599226
04131 Membrane trafficking [BR:
ecad04131
]
122599226
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122599226
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122599226
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122599226
Translation factors [BR:
ecad03012
]
Eukaryotic type
Elongation factors
122599226
Membrane trafficking [BR:
ecad04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122599226
Exosome [BR:
ecad04147
]
Exosomal proteins
Proteins found in most exosomes
122599226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
122599226
NCBI-ProteinID:
XP_043627628
LinkDB
All DBs
Position
5:complement(44400970..44467684)
Genome browser
AA seq
559 aa
AA seq
DB search
MDEVKAAAAPSEGFDSAAPDFHMTKDSSAPTIQHNRRKRKSKDSGELEAKASHFDKKKRK
STQGCSPKDSGELIAKVAQFDKNRKEESILKAKAAQFDNNRKEESILKAKAAQFDKNQSD
FKLTMDEEKTRINIVVIGHYNSGKSTTTGHLLYKLGEIDKLVIERYEKEAAEMDKSSFKY
AWVLDKLKEERKRGITIDISLSKVETTRYICTVTDAPGHRDYIKNMITGTSPADCAILII
DATFPAYEYGMTLGQTRDHTLLAFTLGVKQMICCCNKMDATSPKYSQSRFHYIVKQLTPF
FWKVGYNSDNISFVPISGFEGENMTERSPNLQWYTGPTLLEAINQINEPKRPSDKPLRLP
VLDVYKIGGIGTVPVGRVATGVIKPGMEVTFGPIDLTTEVKSVQFHNKELPEALPGDFVG
FNVQNVAAKDLKRGYVASNSKDDPAKCAASFTSHVIVMNHPGKIKKGYAPLLCCHTSHTA
VKFAELLTKIDRRTFEELEAEPKFLKNGDAGMVKMVPIKPLVVETFSEYPPLGRFVVRDV
RQTVAVGVIKSVDKRDATG
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagtaaaagcagcagctgctccatccgagggttttgattctgctgccccagat
ttccatatgacaaaagattcatcggctccaactattcaacacaacaggaggaaaaggaaa
tccaaggattcgggtgaactagaagctaaagcgtctcactttgacaaaaagaagagaaaa
tccacacagggttgttcacccaaggattcgggtgaactaatagctaaagtggctcagttt
gacaaaaacaggaaggaagaatccatactgaaagctaaagcggctcagtttgacaacaac
aggaaggaagaatccatactgaaagctaaagcggctcagtttgacaaaaaccagtcagat
ttcaaattaactatggatgaagaaaagactcgtatcaacattgtggtcattggacactat
aattctgggaagtcaacgaccacaggtcacttgctctacaagctcggtgaaatagacaag
ttagtgattgaaaggtatgagaaagaggctgctgagatggacaaaagctcattcaaatat
gcttgggtgttggacaagctcaaggaagagcgtaaacgtgggatcactattgacatttct
ttgtcaaaggttgagaccactcgctatatatgcactgtcactgatgcccctgggcatcgt
gactatattaagaacatgatcactggaacctccccggctgactgcgcgattctcattatt
gacgctacttttcctgcttatgaatatggaatgacccttggacagacacgtgatcacact
ttgcttgcatttacacttggtgtcaagcagatgatttgctgctgcaacaagatggatgct
acttcacccaaatactcgcaatctaggttccattatattgtcaaacaattgactcccttc
ttttggaaagttggatataactctgataacatctcgtttgtcccaatttctggttttgag
ggcgagaacatgaccgagaggtcacctaaccttcagtggtacacgggtccaactctactt
gaagccattaaccagatcaatgagccaaaaagaccatctgacaagcctcttcgccttccc
gtacttgatgtctataagattggtggcattggaactgtgccagtgggacgtgttgcaact
ggtgtgatcaagccaggtatggaggtcacttttggcccaattgatttgacaactgaagtc
aaatctgtacagtttcacaacaaagaactgcctgaggcattgccaggagactttgttggt
ttcaacgttcagaatgttgctgctaaggatcttaagcgtgggtatgttgcttcaaactct
aaggatgaccctgcaaagtgtgctgctagttttacatctcatgtaatcgtcatgaaccac
cctggtaaaattaaaaaagggtatgcaccattgctatgttgccatacttctcacactgct
gttaagtttgctgaacttttgaccaagattgaccggaggacttttgaggagcttgaggcg
gaacccaagttcttaaaaaatggtgatgctggaatggtgaagatggttccaataaagccg
ctggtggttgagactttctccgagtatcctccattgggtcggtttgttgtaagggacgtg
aggcagactgttgctgtgggcgtgatcaagagcgtggataagagggatgcaactgggtga
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