Erigeron canadensis (horseweed): 122599228
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Entry
122599228 CDS
T07610
Name
(RefSeq) RNA-binding protein Y14A
KO
K12876
RNA-binding protein 8A
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
ecad03015
mRNA surveillance pathway
ecad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122599228
09122 Translation
03013 Nucleocytoplasmic transport
122599228
03015 mRNA surveillance pathway
122599228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122599228
03041 Spliceosome [BR:
ecad03041
]
122599228
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122599228
Spliceosome [BR:
ecad03041
]
Complex C
Other components
EJC/TREX
122599228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
122599228
NCBI-ProteinID:
XP_043627643
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All DBs
Position
1:53345374..53347664
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AA seq
201 aa
AA seq
DB search
MANAGDVDALDFEPDEDDLMVMDEDAAVDVDPSSPSAAAAHIPKLKSAITGGSAAAPKKT
KGRGFREETDAERMNRMSGRFDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLQNAFG
EYGEIKNLHLNLDRRTGFVKGYALIEYENYEEAEKAIASMDGGELLTQIVHVDWAFSRGP
FKRRNNRRRSPRRSRSPRRRF
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgctggtgatgtggacgcactggatttcgagcccgatgaggatgatcttatg
gtgatggacgaagacgccgccgttgacgtggatccatcttcacctagcgccgccgccgct
catatccctaaacttaaatctgctatcaccggtggatctgccgccgctcctaagaaaact
aaaggccgtggctttcgtgaagaaactgatgctgagcgtatgaatcgtatgtctggccgt
ttcgattctctcgattccgatggcggccccggtcctgaacgatcaattgaagggtggatt
attcttgttactggagtgcatgaggaagcacaagaggatgacttacaaaatgcatttgga
gagtatggggagatcaagaacttgcatttaaatcttgatcgccgaactggatttgttaag
ggctatgcacttattgaatatgaaaattatgaggaggcagagaaagctatagcctcaatg
gatggaggagaacttctcactcaaatagtccatgttgactgggcattcagcaggggtcct
tttaaaaggagaaataacagaaggagatcacctcgtcggtctagaagtccccggagaaga
ttttga
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