Erigeron canadensis (horseweed): 122599236
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Entry
122599236 CDS
T07610
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00541
Biosynthesis of various nucleotide sugars
ecad01100
Metabolic pathways
ecad01250
Biosynthesis of nucleotide sugars
Module
ecad_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
122599236
Enzymes [BR:
ecad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
122599236
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
Motif
Other DBs
NCBI-GeneID:
122599236
NCBI-ProteinID:
XP_043627649
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Position
5:30167341..30171296
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AA seq
672 aa
AA seq
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MATYTPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSSLKNLNPSRSSPNFK
FVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIRRFIHVSTDEVYGETEEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMRGKTLPIHGDGSNVRSYLYCEDVAEAFEVILH
KGEVGHVYNIGTKKERRVIDVAKDMCKLFNMDPDASIKFVENRPFNDQRYFLDDEKLKSL
GWSERTLWEEGLKKTIEWYTSNPNWWGDVSGALLPHPRMLMMPGGVDRLVDGPENSEFDS
SDVAINTSQIGVQVPSKSTINSPKKPALKFLIYGKTGWIGGLLGKLCEKQGITYEYGRGR
LEDRSQLLADIQSIKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVSGTLNIADVCRESG
LVMINFATGCIFEYDAKHPEGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKEYDNVCTLR
VRMPISSDLNNPRNFITKIARYDKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPG
VVSHNEILEMYKKYINPEFKWVNFTLEEQALVIVAPRSNNELDASKLKKEFPELLSIKES
LIKYVFEPNKKQ
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggctacttatacgccgaagaatatactgatcactggggcagctggctttattgcatct
catgttgctaatcgcctaattaggaactaccctgattacaagattgttgtgcttgacaag
cttgattattgctcgagtctcaagaatcttaatccgtctagatcatctcctaatttcaag
tttgttaagggggatattgggagtgctgatttggttaactatcttttgattaccgagtct
attgatacgataatgcactttgctgcacagactcatgttgataactcgtttggtaatagt
tttgagtttacgaagaataatatctatggcacccatgttcttcttgaggcctgcaaggtt
actggtcagattagaaggtttattcatgtaagtacagatgaggtgtacggtgaaacggag
gaggatgctgttgttggtaaccatgaagcttcgcagcttcttccaacgaacccatactct
gccactaaagctggtgctgaaatgcttgtcatggcgtatggtaggtcatacgggttgccg
gtgatcaccaccagagggaataatgtttatggtccaaaccagttcccggagaagcttatc
ccgaagttcatccttttggccatgagaggaaagacacttccgattcatggtgatggatct
aatgttaggagttatctctactgtgaggacgttgctgaggcttttgaagtgattcttcac
aagggtgaagttggtcatgtttataatattgggacgaagaaggagagacgagttattgat
gttgcaaaagatatgtgcaagcttttcaatatggatcctgatgcaagcatcaagtttgtg
gagaataggccgttcaacgatcagaggtacttcttggatgacgagaaattgaagagcttg
ggttggtctgaaaggaccttatgggaggagggtcttaaaaagaccatcgaatggtatact
agcaatcctaattggtggggagatgtctctggagcgcttcttcctcatccaagaatgttg
atgatgcccggtggagttgataggcttgttgatggacctgaaaattctgagtttgattca
tctgatgtcgcaatcaatacttctcagattggtgttcaggttccttcaaagtccactatc
aactctcctaagaaaccagctttgaagttcctcatctatggtaaaactgggtggatcggt
ggcctacttggaaagttatgtgagaaacaaggaattacatacgagtatggaagaggtcgt
ttggaagaccgttcacaacttctggctgatattcaatctattaagcctactcatgttttt
aatgctgctggtgtcactggtagacctaatgttgattggtgtgaatctcacaagaccgaa
actattcgtacgaatgtgtcgggcactcttaatatagcagacgtgtgcagagaaagcggg
cttgtgatgatcaattttgctactggatgcatttttgagtatgatgctaaacaccctgaa
ggttctggcattggttttaaggaagaagatacacccaatttcgttgggtccttttattcc
aagaccaaagctatggttgaggagctattgaaagagtatgacaatgtatgcaccctcaga
gtgaggatgcccatatcatcagacctcaacaacccacgtaacttcatcaccaaaattgct
cgttacgataaagttgtgaacatacccaacagcatgactattttggatgaacttttacca
atttcgattgagatggccaagagaaatttgacgggaatctggaacttcacaaatcctggg
gtggtaagccacaatgagattcttgaaatgtacaagaagtacataaacccagaatttaaa
tgggttaacttcacactggaagaacaagccctagtgatagtcgccccgcgaagcaataac
gagttggatgcatcaaagttgaagaaagagttcccagaattactttcaatcaaggagtca
ttaatcaagtacgtattcgaacccaacaaaaagcagtaa
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