Erigeron canadensis (horseweed): 122599285
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Entry
122599285 CDS
T07610
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03082
ATP-dependent chromatin remodeling
ecad03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122599285
03083 Polycomb repressive complex
122599285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecad03036
]
122599285
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
122599285
Histone modification proteins
HAT complexes
HATB complex
122599285
HDAC complexes
Sin3A-HDAC complex
122599285
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
122599285
PRC2.2
122599285
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
122599285
Heterochromatin formation proteins
Other heterochromatin formation proteins
122599285
Chromatin remodeling factors
NuRD complex
122599285
NuRF complex
122599285
NuRF complex (fruit fly)
122599285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_HPS5
eIF2A
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
122599285
NCBI-ProteinID:
XP_043627707
LinkDB
All DBs
Position
5:567210..573859
Genome browser
AA seq
500 aa
AA seq
DB search
MEEIEEAAGGGAGQQQETATVAKKRGRPKGSSSSAKKVSTEQHEEIVVKMKSNKKGGGGA
VDEKYAHWKSVVPILYDWLANHNLVWPSLSCRWGPLLEQSKNKNRQRLYLSEQTDGSVPN
TLVIANCDVVKPKVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNKNIIATH
TDCPEVLIWDVEAQPNRYAVLGATESHADLVLTGHADNAEFALAMCPTEPYVLSGGKDKY
VILWSIHDHISTLSGEPGSTGSIVKTADNASLGPRGIFQGHTDTVEDVQFCPTSAQEFCS
VGDDSCLILWDARIGTKPIMKVEKAHNADVHCVDWNPHNENFILTGSADNSVCMFDRRNL
TTNGVASPVHKFQDHKAPVLCVQWCPDKSSVFGSSAEDGFVNIWDYEQVGNKMEDGTVSP
NTTSGLFFKHCGHRDKVVDFHWNVYDPWTVVSVSDDVETISGGGTLQIWRMSDLIYRPRD
EVLTELEDFKAHVAACGPKA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaattgaagaagcagcaggcggaggagcaggacaacaacaagaaacagctaca
gtagctaaaaaaagaggaagaccaaaaggctcctcctcttctgcaaaaaaagtcagcact
gaacaacacgaagaaattgtggtgaaaatgaaaagcaacaaaaagggcggaggaggtgct
gtcgacgaaaaatacgcacactggaagtcagtcgtcccgattctttacgactggctcgct
aatcataaccttgtttggccctctctctcttgccggtgggggccgttgctggaacaatca
aagaacaagaacaggcaacgcttgtatctttcggaacagactgatggcagtgttccaaat
acgctggtaatagcaaattgtgatgtagtgaagccgaaagtagctgctgctgaacacata
tctcagtttaacgaagaagctcgatctccgtttgttaagaagtacaaaactatcattcat
cctggggaggtgaacagaatcagggaactgccacaaaacaagaacataattgccacacac
actgactgccctgaggtcctcatctgggatgttgaagcacaacccaatcgttatgctgtt
cttggagctactgaatctcatgcggatctggtgcttacaggtcatgctgacaatgcagaa
tttgctcttgcaatgtgcccaaccgaaccctatgtactctctggagggaaggataaatat
gtgattttatggagtattcatgaccatatttcaacattgagtggagagccagggtctaca
ggttcaattgttaaaaccgctgataatgcttctctcgggcctcgtgggatctttcagggg
catacagatacggtggaagatgtgcagttctgcccaacaagtgcgcaggagttttgtagt
gttggagatgattcttgcttgatattgtgggatgctagaattggaactaaaccgataatg
aaggtcgaaaaagcacataatgctgatgtgcactgtgttgattggaatcctcataatgag
aactttattctaactgggtcagctgataactctgtttgcatgtttgaccgccgaaaccta
accaccaatggggttgcttctcctgttcataaatttcaagaccacaaagctcctgttctc
tgtgtccagtggtgtcctgacaagtcttcagtttttgggagttcagcagaagatggtttt
gtaaatatctgggattatgaacaggttggtaacaagatggaagatgggacagtatctcca
aacactacctcggggctgttctttaaacattgtggacacagggacaaagtggttgacttt
cattggaatgtttatgatccatggactgttgtcagtgtatcagatgatgttgaaaccata
agtggtgggggcacccttcagatttggcgcatgagcgatttgatttacagacccagggat
gaagtattaactgagttagaggacttcaaggcgcatgtcgcagcatgtggtccaaaggca
tag
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integrated database retrieval system
