Erigeron canadensis (horseweed): 122599289
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Entry
122599289 CDS
T07610
Name
(RefSeq) serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122599289
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecad01009
]
122599289
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122599289
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122599289
03041 Spliceosome [BR:
ecad03041
]
122599289
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
122599289
Protein phosphatases and associated proteins [BR:
ecad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
122599289
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122599289
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122599289
Spliceosome [BR:
ecad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122599289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
122599289
NCBI-ProteinID:
XP_043627714
LinkDB
All DBs
Position
5:39688022..39692759
Genome browser
AA seq
321 aa
AA seq
DB search
MEEATVDEIIRKLMDAKGGRVPKQAQITETEIRQLCAAAKDVFLSQPNLLELEAPIKICG
DIHGQYSDLLRLFEYGGYPPESNYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRG
NHECASINRIYGFYDECKRRFNVRLWKTFTECFNCLPVSALIDEKILCMHGGLSPDLKNL
DQIRNIARPVDVPDQGLLCDLLWADPDRDLEGWGENDRGVSYTFGADKVAEFLEKHDLDL
ICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKG
KFDFGNSMLRPGTPPHKGGKR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcgacagtagatgagataataaggaagctaatggatgcaaagggaggacgt
gtaccgaaacaagcgcagattacggaaaccgagatacggcagctgtgtgctgctgctaaa
gacgtttttctcagtcagcctaatttgcttgaacttgaagctcctattaagatttgtggt
gacatccatggacagtattctgacctgttacggttgtttgagtacggtgggtaccctcca
gagtcaaattacttatttttgggagattatgttgatcgtggtaaacagagcatagaaaca
atatgccttctcctcgcttacaagataaaatacaaggaaaacttctttcttctcagggga
aaccatgagtgtgcttccatcaatcgcatatatggcttctatgatgaatgcaaaagaagg
ttcaatgtccgtctttggaagacatttactgagtgcttcaactgcttgcctgtctctgct
cttattgatgagaagatactttgtatgcatggaggactgtctcctgacttaaaaaacctg
gaccagattcgaaatatagcccgtcctgttgatgtgccagatcagggacttctttgtgat
ttgttatgggctgatcctgatagagatctggaagggtggggtgagaatgacagaggcgtg
tcatatacatttggggctgacaaggttgcggaatttcttgagaagcatgatcttgatctt
atttgcagagctcaccaggttgtggaagatgggtatgagttttttgcgaaccggcagctg
gtaaccatattctcagccccaaactactgcggtgagtttgacaatgctggtgcaatgatg
agcgtggatgatacattgacctgttcttttcaaattctcaaagcttcagaaaagaaaggg
aagtttgactttggcaacagtatgttgagaccaggaactccaccacacaagggtggaaaa
agatga
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integrated database retrieval system
