Erigeron canadensis (horseweed): 122599303
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Entry
122599303 CDS
T07610
Name
(RefSeq) uncharacterized protein LOC122599303
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122599303
Membrane trafficking [BR:
ecad04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
122599303
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
RH_dom
FYVE_2
Motif
Other DBs
NCBI-GeneID:
122599303
NCBI-ProteinID:
XP_043627734
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All DBs
Position
5:30380688..30384918
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AA seq
521 aa
AA seq
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MEDTNNGVGYPKIHLDDDYQPKFFNSKVSEGVDESSEVGDIGGGHDLSKVENVEPEIEKS
DIMVESELGSDTHKDSDLEGEKERPFFYYDPPLNEDTGVWIPVSVPPMSESQREEWNKGL
CIRDNDLDWDQFVGEDKDLTMWDVVLDMLLAAQGKVRSITSGDSYAYQISWLSDQLLEHT
WKEVSHNLTEVNADTIKELLEAEPPKWLADSAASYCMLCNVRFHPIICSRHHCRFCGGLF
CNECSKGRSLLPAKFLKGNPQRVCDVCCVRLETVQPYLMDQVSRAAQVPAQDLTDLSTLR
SWLNFPWGQTMEYEIYKAANTIRGYFKVGSLTPEKSIPDSILKQAKGLAILTVVKVGMMV
TYNVGTGLVVARRQDGSWSPPSAISSFGMGWGAQVGGELTDFIIVLRNSDAVRTFGGNAH
LSVGAGASAAAGIVGRAAEADFRAGDGGYAACYTYSCSKGAFVGCSLEGSIVTTRAQENC
RFYGNPSITTSDILLGSLPRPPAAAILYNALSELYMKVERY
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggaagacactaataatggtgttggataccccaagattcatcttgatgatgattaccaa
cctaaattctttaattccaaggtttctgaaggggttgatgaatctagcgaggtcggagat
atagggggaggtcacgatcttagtaaagtggaaaacgtggaacccgagatcgagaagtca
gacataatggttgaaagtgagttggggagtgatactcataaagactcagatcttgagggt
gaaaaagaaagaccatttttctattatgacccaccacttaatgaagatactggtgtttgg
attcctgtttcggttccaccaatgtcggaaagtcaacgcgaggaatggaacaaaggtcta
tgtatacgtgataatgacttggattgggaccagtttgttggtgaagataaggacttaacc
atgtgggacgttgttcttgatatgttacttgcggctcaagggaaagtgagatctatcact
tctggcgattcttatgcatatcaaatttcatggttatcggatcagctactcgaacatacg
tggaaagaagtgtcccataatcttacagaggttaatgctgatactataaaggaactttta
gaagctgagccacctaaatggctggctgatagtgctgcgtcttattgtatgctttgtaat
gtgcggtttcatcctattatatgctctagacatcactgtcggttttgtgggggacttttc
tgtaatgagtgttctaagggcaggagtttactgccagcaaagttccttaaaggaaaccca
cagcgtgtctgtgatgtttgctgtgtacggctcgagacagttcaaccctacttaatggac
caagtgagtcgtgcagcacaagtgccagcacaggacttgactgacctaagtacattgagg
tcatggctcaatttcccatggggacaaaccatggaatatgagatttataaggctgcaaac
accattcggggttactttaaggttggttctttgacaccagaaaagtcgataccagattct
atattgaaacaagccaaaggccttgcgattcttactgttgtaaaagttggcatgatggtt
acctacaatgttggtacaggtttggttgttgctcgtagacaagatggatcttggtctcca
ccatctgctatttcttcatttggtatgggttggggagctcaggtcggaggggagcttact
gatttcataatcgtgctcagaaatagtgatgcagtgaggacatttggtggaaacgcacat
ctatctgtaggagctggtgcgagtgctgctgctggaattgttggaagagctgctgaagct
gattttcgggctggtgatggtggatatgctgcttgctatacatacagttgtagtaaaggt
gcttttgttggttgctcactagaagggagcattgtgaccacacgtgcacaagaaaattgc
agattttatggtaacccgtctattacaacatcagatattcttcttggttcattgcctcga
cctcctgctgctgcgattctttataatgcactctcagaattgtacatgaaagttgagagg
tattaa
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