Erigeron canadensis (horseweed): 122599321
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Entry
122599321 CDS
T07610
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122599321
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecad01007
]
122599321
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122599321
Enzymes [BR:
ecad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
122599321
Amino acid related enzymes [BR:
ecad01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122599321
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122599321
Prokaryotic type
122599321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
tRNA-synt_His
Motif
Other DBs
NCBI-GeneID:
122599321
NCBI-ProteinID:
XP_043627753
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Position
5:43844217..43852344
Genome browser
AA seq
690 aa
AA seq
DB search
MGKAANPASKSASKSAVSIVKDDAYLDSVIPKRIELFETLKAQQIAHRQTISGDPIKVKL
PDGTVKEGKKWETTPLDIAKELSKSLASNALISQVDGVLWDMTRPLEGDCELKIFTFDSD
EGRDTFWHSSAHILGQALEMTYGCKLCIGPCTTRGEGFYYDGFYGELGLNDDHFDQIVNG
AKKAVAEKQPFERIEVSRKQALEMFSDNKFKVEIISDLPEDKTITVYRCGPLVDLCRGPH
IPNTAFVKAIACLKASAAYWRGNKDRESLQRVYGISYPDQKRLKEYIALLEEAKKYDHRE
LGKKQELFFFHPLSPGSCFFLPHGTRVTEKLMTFIRTEYRRRGYLEVTTPNMYNMQLWET
SGHAANYKENMFVFDIEKQEFGLKPMNCPGHCLMFDYRVRSYRELPLRLADFGVLHRNEA
SGALTGLTRVRRFQQDDAHIFCRESQIKDEVKSVLKFIDYAYDVFGFTYELKLSTRPEKY
LGDLETWDKAEKALEGALNEFGKPWQINEADGAFYGPKIDISVSDAMKRKFQCATLQLDF
QLPERFNLSYSAEDETKRERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCP
VSDKSQAYGQQVKDQIDEAGYYVDIDTSDRTIQKKVREAQLAQYNYILVVGEEEANNGKV
SVRVRDKQEHLVQSIPDLLKHFKDEVKAFH
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagcagccaatcctgcttcaaagtcagcctcaaaatctgcagtttcaatagtg
aaggatgatgcttatcttgattctgttataccaaaacgaattgaattgtttgaaactctt
aaagctcaacagattgctcatcgccagactatttccggtgaccccatcaaggttaagtta
cctgatgggactgtgaaggagggaaagaagtgggaaacaactccgttagatatagcaaag
gagttatcaaaaagtctagcatcaaacgctttaatatctcaagtagacggagtattgtgg
gacatgacaagacctttagaaggtgattgcgaacttaaaatattcacttttgatagtgat
gagggccgtgacactttttggcattcgagtgctcatattcttgggcaggctttagaaatg
acatatggatgtaaattgtgcatcgggccatgtactacaagaggagagggtttctactat
gacggtttctatggtgaactcggcttaaacgatgatcactttgatcaaattgttaatgga
gctaagaaagctgttgcggagaaacaaccttttgagcgaattgaagtttcacgaaagcag
gctcttgagatgttttctgataacaagtttaaggttgagatcattagcgacctacccgaa
gacaagaccattacagtttacagatgtggtccattagttgatctttgtcgcggaccacat
ataccaaataccgcttttgtcaaagcaattgcctgcttgaaggcttcggcagcttattgg
aggggaaacaaagaccgtgagagcttacaaagagtttatgggatatcttaccctgaccaa
aaacgcctgaaggaatacattgctctgctggaagaagccaaaaagtatgaccacagagag
ttgggcaagaagcaggaacttttctttttccaccctcttagtccaggaagctgttttttt
cttccccatggtactcgtgtgaccgagaaattgatgacatttatacgaacagagtatcgt
agaagaggttacctagaggttaccacaccgaatatgtacaacatgcaactgtgggaaact
tcaggtcatgctgcgaattacaaggagaacatgtttgtatttgatatagaaaaacaggag
ttcgggcttaagccaatgaattgtccaggacattgcttgatgtttgattaccgagttcgt
tcttatagggaactaccgcttcgtttagctgacttcggggttctgcatcgtaatgaagcc
agtggtgcattgactgggttgactcgtgttcgaaggtttcagcaggatgacgctcatatt
ttctgtagagaatcccagataaaagatgaagtgaagagtgtgttaaagttcatcgattac
gcatatgatgtatttggtttcacctatgaactaaagctatcaacaaggcctgagaaatac
ctcggggatctggaaacatgggataaagcagagaaagcacttgaaggtgcattgaacgag
tttggaaagccgtggcagattaatgaagcagatggggcattttacgggccaaaaattgat
atatctgtttccgatgcaatgaaaagaaagttccagtgtgcaaccttacagttggacttc
caactccccgagagatttaatttgtcgtattcagcagaagacgagactaaaagagagagg
cctgtaatgatacaccgagctattctaggatcagttgaacgcatgtttgctatactattg
gagcattataagggtaaatggccattttggcttagtccccgtcaagcaatcgtttgtcct
gtatctgacaagtcccaagcatatggacaacaggtaaaggaccagattgacgaagctggc
tattatgtggacattgatacttctgatcgaacaatccagaagaaggtacgtgaagctcaa
ctggctcaatacaactacatacttgttgttggcgaagaagaagccaacaatggaaaggta
agtgtgcgagtgagagacaagcaagaacatttggtgcaatctattccagatctccttaaa
cattttaaggatgaagtgaaagcttttcattag
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