Erigeron canadensis (horseweed): 122599351
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Entry
122599351 CDS
T07610
Name
(RefSeq) probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03015
mRNA surveillance pathway
ecad04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122599351
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122599351
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecad01009
]
122599351
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122599351
03036 Chromosome and associated proteins [BR:
ecad03036
]
122599351
Protein phosphatases and associated proteins [BR:
ecad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122599351
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122599351
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122599351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_13
SPARC_Ca_bdg
Motif
Other DBs
NCBI-GeneID:
122599351
NCBI-ProteinID:
XP_043627789
LinkDB
All DBs
Position
5:complement(35261760..35268289)
Genome browser
AA seq
481 aa
AA seq
DB search
MYSGSSDGEGHDASSVASRKIPPASSMLWVRNLRRYIGSGAGLGSEALMELETKRILLDI
FKEKQQKSAEAGTIPSFYKKKPEEGSISRRVQILAKYRFLKKQSDNLLNADDLDAMWVCL
RENCVIDDATGAEKMNYEDFCHIASVCTEQIGPKCRRFFSPSNFMKFEKDESGRIAILPF
YLYVMRTVSLTQARIDMSELDEDSDGFLLPAEMEAYIRGLIPNLAQLRGMTENFIAMYTR
IAAQKFFFFCDPNRRGKACIKKVLLSNCLQELMELHQESEEEATDTEQAENWFSLTSAQR
ICDMFIALDKDQNGTLSKQELREYADGTLTDIFIERAFDEHVTTRRGKNGNGSGREMDFD
SFLDFVLALENKDTPEGITYLFRCLDLHGRGFLTTADIHTLFRDVHQKWIEGGNYELCIE
DVRDEIWDMVKPADPLRITLSDLLSCKQGGTVASMLIDVRGFWAHDNRENLLQEEEEPEE
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtggttcaagtgacggcgaaggtcacgatgcatcatcggtggcttcccggaag
ataccgccggcgtcttccatgctttgggtccgtaatctccgccgttacatcggatccggt
gccggtcttggttccgaagctctaatggagcttgaaacaaaaagaatcttgcttgatata
tttaaagagaagcaacaaaagagtgctgaagctggcacaatcccaagtttctacaagaag
aaacccgaggaaggttctatcagccgtagagttcaaatcttggcgaaatatcgttttcta
aagaagcaatctgataatttgctaaatgctgatgatctggatgccatgtgggtatgccta
agagaaaattgtgttattgatgatgcaaccggtgcagagaagatgaactatgaagacttc
tgccacattgcctctgtatgtacagaacagataggcccaaaatgccgtcgcttttttagc
ccttcaaattttatgaagtttgaaaaggatgaatcaggaagaattgccattctgcctttt
tatctgtatgtaatgcgcacggtttctcttactcaggccagaattgatatgagtgagctt
gacgaggattctgatggtttcctactacctgctgagatggaagcttacattcgaggtctt
attcctaatttggctcaactacgcggcatgactgaaaacttcattgcaatgtatacccgc
atagctgcacaaaagttcttcttcttttgtgatcccaatagacgaggtaaggcatgcata
aagaaggtgctccttagtaactgtctccaagaactaatggaattgcaccaggaaagcgag
gaagaagctactgataccgaacaggctgaaaattggttttcactaacatctgctcagcgt
atatgcgatatgtttattgcacttgataaagatcaaaatggtacactgagcaagcaggaa
cttcgagaatatgcagatgggacactcacagatatttttattgagagggcttttgatgaa
catgtcacgacccgtcgtggtaaaaatggaaatgggagcggtcgggagatggacttcgat
agttttcttgactttgttttagccctggagaacaaagatactccagagggtataacatat
ttgtttagatgtctagatcttcatggaagagggtttctcacaacagctgatattcacaca
ctcttcagagatgtgcaccagaaatggatcgagggtggaaattatgaattatgcatagag
gatgttcgtgatgaaatctgggatatggtgaagccggctgatcctctgaggatcacactt
tcagatttgttatcctgcaaacagggtggaactgttgccagcatgcttatagatgtacgt
ggtttctgggcccatgacaaccgagaaaatcttctacaagaagaggaggaaccagaagaa
gaatag
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