Erigeron canadensis (horseweed): 122599388
Help
Entry
122599388 CDS
T07610
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122599388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122599388
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
122599388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
122599388
NCBI-ProteinID:
XP_043627830
LinkDB
All DBs
Position
5:378203..381441
Genome browser
AA seq
231 aa
AA seq
DB search
MFVNHHGLLNINSYEVDQEEEGDKNGRNSNLVVVDIYPLSNYYFTSKQPHISSFVKDQES
LADRALRLKSNYEIHGMRTCVEAVILVELFKHPHLLLLQTRNYVYKLPGGRLRPGESDVN
GMKRKLLSKLSADDDSHRTEWKVGECIGTWWRSDCETLPFPYLPASGKSPKECIKLYLVK
LPLSREFVVPKNFKLLVVPMCQLHESSETYGSVIAGIPQLLSRFSINMINT
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttaatcatcatggattattgaacattaatagttacgaagtagatcaggaagaa
gagggagataaaaatggtaggaattctaatttagttgttgtggatatttaccctctcagt
aactattacttcacctcaaaacaaccacacatttcctcattcgtcaaggatcaagaaagc
ctagctgatcgtgcactacgtctcaaatccaattatgaaattcatggaatgaggacttgt
gttgaggctgtcatattggtagaactgttcaagcatcctcatttgttgttgcttcaaacc
agaaactacgtttataagcttcctggtggccgcttacgaccaggtgaatcagatgtcaac
ggcatgaagcgtaagctattaagcaaactatctgctgatgatgatagccaccggacagaa
tggaaggttggcgaatgcattggaacatggtggagatcggattgtgagacattgcctttc
ccatatctacctgcaagtggtaaatctcccaaggagtgcattaaactctaccttgtgaag
ttgccactgagtcgggaatttgttgtgccgaaaaacttcaagttactagttgttccaatg
tgccagcttcacgaaagttccgagacatatggatcggtaatagctgggattccgcaacta
ctctcaaggttctctatcaacatgataaacacttaa
DBGET
integrated database retrieval system
