Erigeron canadensis (horseweed): 122599440
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Entry
122599440 CDS
T07610
Name
(RefSeq) serine/threonine-protein kinase VPS15
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04136
Autophagy - other
ecad04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
122599440
04136 Autophagy - other
122599440
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ecad01001
]
122599440
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122599440
Enzymes [BR:
ecad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122599440
Protein kinases [BR:
ecad01001
]
Serine/threonine kinases: Other
VPS15 family
122599440
Membrane trafficking [BR:
ecad04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122599440
Autophagy
Autophagosome formation proteins
PI3K complex
122599440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIK3R4-like_middle
Pkinase
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_IFT122_1st
WDR55
WD40_CDC20-Fz
WD40_Prp19
HEAT
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_NOL10_N
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Beta-prop_EML_2
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
PK_Tyr_Ser-Thr
CFAP251_N
HEAT_2
HEAT_EZ
PEP5_VPS11_N
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Cohesin_HEAT
Adaptin_N
TCAD9
APH
Beta-prop_Vps41
YfhP_M
Motif
Other DBs
NCBI-GeneID:
122599440
NCBI-ProteinID:
XP_043627888
LinkDB
All DBs
Position
5:1063479..1072792
Genome browser
AA seq
1417 aa
AA seq
DB search
MGNKIARTTQASATEYYLHDLPSSYNLVLKEVLGRSRFLKSIQCKHDEGLVLVKVYFKRG
DSIDLKDYERRLARIRDIFNRIENPHVWPFQFWLETDKAAYLLRQYFFNNLHDRLSTRPF
LSLVEKKWLAFQLLCAVKQSHDHGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPHDD
PSDFSFFFDTGGRRRCYLAPERFYEHGGEIQVAQDAPLRPSMDIFAVGCVIAELFLEGQP
LFELSQLLAYRRGQFDPSQHLEKIPDSGIRKMILHMIQLDPESRCSAESYLQSYAGVVLP
CYFSPFLHNLYSNLNPINPDSRVAMCQLSFPEILKQMLSNKVEEVHFSENSQNHKQGKLL
QTISSVFKRNHHPFLREVTMKDLNSLMSDYDNQSDTFGMPFLPLPEDNTSCEGMVLIASL
LCSCIRNVKMPQLRRSAVLLLKSCSLYIDDEDRLQRVLPYVIAMLSDSSAIVRSAALETL
CDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNISKLALTAYGFLIHSI
SLTEAGVLNDLSVNQKSQKITGKNDAQLAQLRKSIAEVIQELVMGPKQTPNIRRALLLDV
GNLCWFFGQRQSNDFLLPILPAFLNDQDELLRSVFYRQIIYVCFVVGQRSVEEYLLPYLE
QALGDSTEGVIVNALDCLAILCTSGFLRKRILLEMIEHAFPLLCYPSQWVRRSAVTFIAA
SSETLGAVDSYVFLVPLIRPFLRRQPASLASESSLFSCLKPPVSRQVFYQILENNRSSDM
LERQRKIWYNSSASSQSKQTETDDMYQKGVRELDQMKMWTDRKPVGTTLQSFSLGEMGSF
ARTASGSVDILDPLFSDKLKFSGFMSPQISGASSLVGEKSSEGIPLYYFKYDNKRASGNA
SFAPESSLTLEAFGSSSLSTNQKDPVNSPPQLHRVVHESEDRELDQTVHVSNKFQELGVS
SSINDNSPTEISGLPSFGGTPVIPDSGWRPRGVLVAHLQEHRSAVNDIAVSTDHSFFVTA
SDDSTVKVWDSRKLEKDISFRSRLTYCLDGSRALCATMLHASAQVAVGASDGTIHMFSVD
YISRGLGSVVEKYSGIADVKKVDIKEGAILTLLNYSSGGDDGKTILYSTQNCGIHLRDTR
ENSNSWNTKVIPEEGYVSALVASPCGNWFVSGSSRGVLTLWDLRFGIPVNSWQYSVACPI
ADMCLFVPPQSTSLSTTVRPLVYVAAGCNEVSLWNAENGSCHQVLRVASTDSDTEISDQP
WALARPSSKTNSKADSRRGVNYKYRVDELNEPPPRSPGIRSLLPLPGGDLLTGGTDLRIR
RWDHCSPERTYCICGPSIKGIGNDEFYETKSSFGVQIVQEAKRRPLATRPTGKAVLAAAA
TDSGGCHRDSILSLASVKLNQRLLLSSSRDGTVKVWK
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggggaataaaatcgcacgaacaacacaagcatcagcaacagagtattatttacacgat
ttaccttcatcttataatttagtacttaaagaggttttaggtcgatcacgttttttaaaa
tctattcagtgtaaacatgatgaaggtttggttttagttaaagtttattttaagcgtggc
gattctatcgatttaaaggattacgaacgtcgtttggctcgtattcgcgatatctttaat
cgtatcgaaaatcctcatgtttggccctttcagttttggcttgaaactgataaagcagct
tacttgttgaggcaatacttctttaataaccttcatgatcgactaagcacacgtcctttt
ctcagccttgttgagaagaaatggttggcttttcagctgctttgtgctgtgaaacagagt
catgaccatggagtttgccatggtgatatcaaatgtgagaatgttttggttacttcttgg
aactggctttaccttgctgattttgcatccttcaaaccaacctatattcctcatgatgat
ccctctgatttctcgtttttctttgataccggaggaagaagacgttgttatcttgcacca
gaaagattttatgagcacggaggtgagattcaagttgcacaagatgcacctttacggcca
tcaatggacatctttgctgttgggtgtgtcattgcagaactttttcttgaaggtcaaccg
ctctttgaactatcacaacttcttgcatatcgaaggggccagtttgatcctagccaacat
ctggagaagattccagattcaggaatccgcaaaatgattcttcatatgattcagctcgat
cctgaatctcgctgctctgctgaaagttatctgcaaagttatgcaggtgttgtgcttcca
tgctacttttcaccgttcctgcataatctgtactcaaatttaaatcctattaatcctgat
tcgcgggtagcaatgtgtcagttgtctttcccagaaatacttaaacaaatgttaagcaac
aaagtggaagaggttcatttttccgaaaattctcagaatcacaaacaggggaaactactc
caaactatctccagtgtatttaagagaaatcaccatccgtttctgagggaggttacaatg
aaagatttgaactctttaatgtctgactatgacaatcagtcagatacatttggaatgcca
tttttacccttaccagaggataacacgagctgtgaaggaatggttttaattgcgtcactc
ctctgttcttgtatacgaaacgtcaaaatgcctcaattaagaagaagtgcagtcctttta
ttaaagtcatgctcgctgtacatagatgatgaggatcggttacagcgtgtgcttccatac
gttattgcaatgctctcagattcgtctgcaattgtcaggtcggctgctttggagactcta
tgtgatatcctaccattagttcgagattttcctccaagcgatgctaagatctttccggag
tatattctcccgatgctttccatgcttcctgatgatccggaagaaagtgtaaggatctgc
tatgccagcaatatatctaaacttgccctaactgcgtacggttttctaattcattcaata
agtttaacagaagcaggggttctcaatgatttaagtgtaaaccagaagtcgcaaaaaata
accggaaaaaatgatgcacagctggcacaactgaggaaatcaatagctgaggttattcaa
gaacttgtaatgggtccaaagcaaactccaaatattagaagggcacttctattagatgtg
ggtaatctttgttggttttttggtcaaaggcagagtaatgactttttattacccatcctt
cctgcatttcttaatgaccaagacgagcttttaagatcagttttttaccgccagataatt
tatgtttgtttcgttgttggtcaacgaagcgtggaggagtatcttttaccttatcttgaa
caggctttaggtgattcaacagagggcgttatagtcaatgcgttagattgcttggcgatt
ctgtgcacgagtggattcttaaggaaaagaatacttcttgaaatgatcgagcatgccttt
ccattgttatgttatccaagtcaatgggtaagaaggtcagctgtaacgttcattgcagca
agtagtgagaccctaggtgctgttgattcctatgtgtttcttgttccacttattcgccct
tttctccgtagacaacctgcatctttagcttccgaaagctcccttttttcatgtttgaag
ccaccagtctcaaggcaagtattctaccaaatcttggaaaataacaggagttcagacatg
ttagaaagacaaagaaagatttggtacaattcatctgcatcttcacagtctaagcaaacg
gaaactgatgacatgtaccagaaaggtgttagagaattggatcagatgaagatgtggact
gatcggaagcctgttggcaccaccttgcagtcattttcgcttggcgaaatgggaagcttt
gctcgtactgcttcgggttcagttgatattttggatcccttattttcagataagttgaag
ttttcaggattcatgtccccacagataagcggtgccagtagtttagttggtgagaaatct
tcagaaggcatacctttatactatttcaaatatgataacaagagagcatccggaaatgct
tcgtttgcaccagaatcgtctttaacattggaggcttttggttctagttctttatccacg
aatcagaaggatcctgttaatagtcccccacaacttcatagagtggtacatgagtcggaa
gatagagaattggaccagacagtccatgtcagcaacaaatttcaggagctaggagtctca
agctctataaatgataactctcccaccgaaatttcaggattaccatcttttggtggaacc
cctgtaattcccgattctggatggcggcctcgtggggtgttggttgcacacctccaagaa
caccgatctgctgtgaatgacatagctgtttcaactgaccacagcttttttgtcactgca
tctgatgattctactgtcaaggtttgggattctaggaaactggaaaaagacatctcgttt
agatctagactaacttattgtctagatggaagtcgagcactctgtgctacaatgcttcac
gcctctgctcaagttgcagttggagcttccgatggcacaattcatatgttttctgttgat
tacatctcgagaggacttggaagtgttgtagagaaatattcgggaatcgctgatgttaaa
aaagttgacattaaagaaggggcaattcttacacttctaaattactcttcaggtggtgat
gatggtaaaacaattctttatagcacccagaactgtggcatccatttacgtgatacacga
gaaaactcaaactcatggaatacaaaagtgattcccgaagagggttatgtatcagcactt
gtggcaagtccgtgtgggaattggtttgtctctggatcatcccgaggtgttcttacatta
tgggatttgaggtttggcatacccgtgaactcatggcaatattcggttgcatgccctata
gcggatatgtgtctttttgttcctcctcagagtacttcgctatctacaacagtgaggcca
cttgtatatgttgcagcaggctgtaatgaagtttctctgtggaatgcagaaaatgggagt
tgtcaccaggtactgagggttgcaagtactgacagtgatacggagatatctgaccaacct
tgggccttggccagaccatctagcaagacgaattcgaaagccgattctaggaggggtgta
aattacaagtacagagtggatgagctgaatgaacctcctccccgatcacctggaattcgt
tcattgctcccgttacctggaggagatctattaactggcggcactgacttaagaattcgt
cgatgggatcattgcagcccagaacgaacttattgcatctgtggtccatctattaaagga
attggaaatgacgagttttatgaaaccaaatccagttttggggtgcaaattgtgcaggaa
gcaaaaagacgacctttggcaactaggccgactggaaaagcagttcttgcagctgctgcc
accgactccggtggctgtcaccgtgactctattctctctctggcttctgtcaaattgaac
cagagactactgttatcaagcagcagagatggtactgtcaaggtttggaagtag
DBGET
integrated database retrieval system
