Erigeron canadensis (horseweed): 122599489
Help
Entry
122599489 CDS
T07610
Name
(RefSeq) ribosomal RNA small subunit methyltransferase E isoform X1
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122599489
Enzymes [BR:
ecad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
122599489
Ribosome biogenesis [BR:
ecad03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
122599489
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-GeneID:
122599489
NCBI-ProteinID:
XP_043627944
LinkDB
All DBs
Position
5:25876696..25884457
Genome browser
AA seq
282 aa
AA seq
DB search
MQTICYTTPRLALLINRKTFKLRAFSSDSSNQSRGGLPRFYSDTLPPSKGSGVRVQGDEF
WHMTKVLRLNLHDRIELFNGKGGLVEGCIERIDRAGADVVALENPKLVPTTSTQWHVFAA
FGTLKGGRSDWLVEKCTELGASSVTPLLTERSPSISENRVDRLQRVILAAAKQCQRLHEL
TLNPPLKVGGLLPIVSQSKLSFIAAAEATPVLNALPLSEKQSVGSLIIGPEGDFTETEVK
SMLEAGATSVGLGPHRLRVETATVALLATAMLWSDSWKLTDP
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactatctgttatactacccctcgtttggccctacttatcaaccggaaaaccttc
aaactccgagcattttcatccgattcttccaatcagtctcgcggcggtctcccgaggttc
tactccgacaccctccctccttccaagggatcaggtgttcgtgtgcaaggagatgaattt
tggcatatgactaaagttcttaggttgaatttacatgacaggatagagctctttaatgga
aaaggaggtcttgttgaaggttgcatagaacggattgaccgagctggagcagatgtagtt
gcacttgagaatccaaaattagtacccacgacttcgacccaatggcatgtgtttgctgct
tttggtactttgaagggtggtcgatctgattggcttgttgagaaatgcacagagcttgga
gcaagcagtgtaacgccgctgttgactgagcgctctccttcaatttctgagaacagagtg
gatagattgcaacgagtcatattggctgcagctaaacaatgtcaaaggctgcatgaatta
actttgaaccctcctttaaaagttggtggcctcttacccatcgtttcacagtcaaaacta
tcctttatagctgcagcagaggctacaccagttttgaatgcgttgcccctgtctgaaaaa
cagtctgttggctcacttattattggaccggaaggcgacttcacagaaacggaggtaaag
tcgatgctagaagcaggagcgacatcagttggtctcggaccacatcgtcttcgagttgaa
actgcaacagttgctcttctggcgacagcaatgttatggtccgactcttggaaactaact
gatccttga
DBGET
integrated database retrieval system
