Erigeron canadensis (horseweed): 122599495
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Entry
122599495 CDS
T07610
Name
(RefSeq) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122599495
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecad01007
]
122599495
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122599495
Enzymes [BR:
ecad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
122599495
Amino acid related enzymes [BR:
ecad01007
]
Aminoacyl-tRNA synthetase
Class II (A)
122599495
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122599495
Prokaryotic type
Other AARSs
122599495
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF7661
PGBA_C
Motif
Other DBs
NCBI-GeneID:
122599495
NCBI-ProteinID:
XP_043627955
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Position
5:6802283..6809105
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AA seq
619 aa
AA seq
DB search
MADPANNIPNDDNNDNSAFSSNPAEKTVSKNAQKKELKNQKKEEEKRLKEKEKEKKAAEK
PKSAVSKQAAADDEEMDPTQYHDNRLKALEAQKAEGLNPYPHKFHVSMSVPEYIQKYEYL
NKGEHLEDVEVSLAGRLMSKRSSSSKLFFYDLIGSGAKVQVMADARTSILDEVEFSKYHA
GVKRGDIVGVVGFPGKSKKGELSIFPKSFTALSHCLHMMPRQKSAAAVENPNIKKLDAWT
PGISRNPDAYILKDQETRYRQRYLDLMVNSEVRHIFKTRAKIVAYVRRFLDNLDFLEVET
PMMNMIAGGAAARPFVTHHNDLNMRLFMRIAPELYLKELVVGGLERVYEIGKQFRNEGID
LTHNPEFTTCEFYMAYADYNDVMELTEQMLSGMVKELTGGYKVKYHANGLDNDPIEIDFT
PPFRRIDMIDGLEEIANLSIPKDLASDEANKYLADACTKFDIKCPPPQTTARLLDKLVGH
FLEEQCVNPAFIINHPEIMSPLAKWHRSKPGLTERFELFINKHELANAYTELNDPVVQRE
RFANQLKDRQSGDDEAMALDETFIKALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLF
PAMKPQDEPPVKAVEALKI
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccagctaataatatacctaacgacgacaacaacgataactcggctttttct
tccaatccagcagagaaaaccgttagcaaaaatgctcagaagaaagagctgaagaaccaa
aagaaggaggaagagaaacgccttaaggaaaaggaaaaggagaaaaaggctgccgaaaag
ccaaaatcagcagtctcgaagcaggctgctgcagatgacgaggagatggacccaacgcaa
tatcatgacaacaggctgaaagcgcttgaggctcaaaaggcagaaggattgaatccttac
cctcacaaattccatgtatcgatgtctgttcctgaatacatacagaagtatgaatacttg
aataaaggggaacatttggaggatgttgaagtatcgttggctgggcgactgatgagcaaa
cgatcttcatcatcaaagctgtttttttacgacttgattggttctggggctaaggtgcaa
gttatggctgatgcaaggacttccattttggatgaagttgaattttccaagtaccatgct
ggtgtgaagcgtggagatattgttggcgtcgtcgggtttccaggaaaaagcaagaaaggc
gagctgagtattttcccaaagtcattcacagctttatcacattgtcttcatatgatgcct
aggcaaaagagtgcagctgctgttgaaaatcctaatataaagaagttggatgcttggact
cctggaattagtagaaatcctgatgcttatatattgaaggaccaggaaactcgttatcgc
cagcgttatctggatttgatggtaaattctgaagttagacatatattcaaaacccgagca
aagatcgtagcttatgttagacgttttctcgacaatcttgattttttggaggttgaaact
cctatgatgaacatgattgctggcggggcagcagcgcgtccatttgtgacacatcacaat
gatctaaacatgcgactgtttatgcgaattgcccctgaactttatctgaaggagcttgtt
gttggtggacttgagcgtgtatatgagattggtaaacagttcaggaatgagggaatagat
ctgacacacaatcctgaattcacaacctgtgaattctatatggcttatgcagattataat
gatgtgatggagctaactgaacaaatgttgagtggcatggtcaaggagctgacaggtggt
tacaaggttaaatatcatgccaatgggttagataatgaccctattgaaatcgacttcact
ccccctttcagacggattgatatgattgacgggttggaggagatagccaatcttagcata
cccaaagaccttgcgagtgatgaagccaataaatatcttgctgatgcatgcacgaagttt
gatatcaaatgtcctccgcctcaaacaacagcaagattgttggacaagcttgttggacac
tttttggaggagcaatgtgttaatcctgcttttattataaaccaccctgagataatgagt
ccactggcaaaatggcatcgttccaagccaggcttaactgaacgttttgaattgtttatc
aacaagcatgagcttgccaatgcatacactgaacttaatgatccagtggtacagcgagaa
cgctttgccaatcaactgaaggatcgacaatcaggggatgatgaagcaatggctttagat
gagacttttattaaggctcttgaatatggtttaccaccaactggtgggtggggtttgggt
attgataggcttacaatgttgcttacggattcacagaacatcaaggaagttctacttttc
ccggctatgaaaccacaggatgagcctcctgtcaaagctgtagaagctttgaaaatctga
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