KEGG   Erigeron canadensis (horseweed): 122599587
Entry
122599587         CDS       T07610                                 
Name
(RefSeq) ras-related protein RABA1f-like
  KO
K07904  Ras-related protein Rab-11A
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122599587
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122599587
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecad04147]
    122599587
   04031 GTP-binding proteins [BR:ecad04031]
    122599587
Membrane trafficking [BR:ecad04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    122599587
Exosome [BR:ecad04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   122599587
  Exosomal proteins of colorectal cancer cells
   122599587
GTP-binding proteins [BR:ecad04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    122599587
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_22 AAA_14 AAA_16 Gtr1_RagA TniB AAA_21 ABC_tran AAA_24 FAD-SLDH NTPase_1 AAA_5 DUF6231
Other DBs
NCBI-GeneID: 122599587
NCBI-ProteinID: XP_043628051
LinkDB
Position
5:30977794..30980840
AA seq 217 aa
MAAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFAKNEFNLESKSTIGVEFATRSIRVDDK
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTSRHVTFENVERWLKELRDHTDQNIV
IMLVGNKSDLRHLRAVPTEEAKAFAEKENTYFMETSALEALNVETAFTEVLTQIHNVVSR
KALDAGNDASSLPKGQTINVGSKDDVSAVKKVGCCSA
NT seq 654 nt   +upstreamnt  +downstreamnt
atggcggcttacagagccgacgatgactacgattatcttttcaaactagtcctgatcggc
gattcgggtgtgggcaaatccaatttactttcaagatttgctaaaaatgaatttaatctt
gagtcaaagtcaactattggagttgaattcgccactagaagtattcgtgttgatgataaa
attgttaaagctcagatttgggatactgctggtcaagaaaggtaccgtgcgattacaagt
gcatactacagaggtgctgttggtgctttacttgtgtacgacacttcacgccacgttact
tttgagaacgttgagagatggttgaaagagctacgggaccacactgaccagaatattgtg
atcatgctagtgggaaacaagtccgacttacgacacttgcgtgcagtccccacagaggag
gcaaaggcatttgctgaaaaggaaaatacctattttatggagacatcagctcttgaggcg
ttgaatgttgaaaccgcctttactgaagtgcttacacaaatacataacgtggttagccga
aaagcacttgatgcaggtaacgatgcttcatctttacctaaagggcaaaccattaatgtt
ggatcaaaggatgatgtctctgctgtgaagaaagttggttgctgttctgcttaa

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