KEGG   Erigeron canadensis (horseweed): 122599634
Entry
122599634         CDS       T07610                                 
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16-like
  KO
K14791  periodic tryptophan protein 1
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ecad03009]
    122599634
Ribosome biogenesis [BR:ecad03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    122599634
  Pre-60S particles
   Other pre-60S particles
    122599634
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_WDR5 WDR55 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 EIF3I Beta-prop_EIPR1 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_WDR41 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 122599634
NCBI-ProteinID: XP_043628107
LinkDB
Position
5:28251432..28260643
AA seq 377 aa
MEEIRPEDMEPLISWSNDNGGELLVYRPIEDTNASSSDDTNDSAGTFQVSHHIDTMTARQ
GDLTKCHSIDITRVRLKKTPSVEVPETAKIDPPLCMECLHFNSVNSIAFGMRNSIQIRYL
RQDHGGDENDFYANEKIKKKFLFGGTRLMDGKKDGVAVCKEWTRRGSHETRVLDLSINQK
RDLLASAGADKEVKIWSLETSKRLTDIKLHELKVNAVSWHHGGRCLLSGSMDRKIYMMDL
REDITKVEGTKWWETNHGVKSLAWNPTVDHKFMALLDDGEVIFYDSRNFSPENSIPASEN
KADKISAVAYHPCKKNVFATGSSSGELKVWDQNQLSQHLSEQKVCKGKISKLTYRTNDPI
LAYASSSYEVGTIKDES
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggaagaaataagacccgaagatatggaacccttaatatcatggtctaatgacaatggt
ggagaattgttagtctaccggccaatagaagacacaaatgcgtctagttcagatgataca
aatgattcagccggcacttttcaagtctctcaccatattgatacgatgactgcgcgtcag
ggtgacttgacaaagtgtcattctattgatattacacgggtacgattaaaaaaaacccca
tctgttgaagtacccgagactgccaagatagatcctcctctatgcatggagtgtttgcat
ttcaactcagtgaattctatagcttttggaatgaggaactccatacagatacgctacttg
agacaggaccatgggggtgatgaaaatgatttttacgctaatgagaagataaagaaaaag
ttcttatttggaggtacgaggttaatggacggaaagaaggatggcgtcgccgtatgtaag
gaatggacaagacgtggctcacatgagactcgtgtgcttgatttatctattaaccagaaa
agagacctccttgcaagtgccggtgctgataaagaggtgaaaatttggagtctcgaaacg
tcaaaacgcctaacagacatcaaactacacgaacttaaggttaatgccgtgagctggcat
catggaggacgttgccttttgagtggatcgatggatagaaagatatacatgatggatttg
agggaagacataacgaaagtagaaggaaccaagtggtgggaaaccaatcatggtgtgaaa
agcttggcttggaatccgacggtggatcacaaattcatggctctgctagatgacggtgaa
gttatcttctatgattcccggaatttttcaccagagaattcaataccggcttctgaaaat
aaagctgacaagataagtgccgttgcttatcacccttgtaaaaaaaatgtttttgccacg
gggtcaagttcgggagagttgaaggtctgggatcagaatcaattgagccaacatttgagt
gagcaaaaagtttgtaagggaaagatctccaagttgacatatcgaacaaatgatccaatt
ttggcatatgcttcttcaagctatgaagttgggaccatcaaggatgagtcctaa

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