Erigeron canadensis (horseweed): 122599643
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Entry
122599643 CDS
T07610
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 14
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122599643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecad04040
]
122599643
Ion channels [BR:
ecad04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122599643
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
122599643
NCBI-ProteinID:
XP_043628120
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Position
5:complement(35277333..35283321)
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AA seq
724 aa
AA seq
DB search
MDFKTGKQVRFYTGENGKSNYDHSWQLPDKQVPEHKVSAPLLMNNGKGRNFPTLNHMGIK
LGKYPDENSNDSKGKKVLDPGSEIILQWNRIFLFSCLVALFVDPLFFYLPSVQNKDEDES
ACMLSDLNLGIIVTCLRTMADIFYMLNIVIKFRTAYVSPSSRVLGRGELVMDLDKIARRY
LKSNFFIDLVATLPLPQIVIWFIIPAIRTPRADHTTNALVLIVLLQYIPRLYLIFPLSSQ
IIKTTGVVTKTAWAGAAYNLVLYMLASHVLGASWYLLSFERHATCWKSTCRQNNNCVLRY
LDCGSSDDDERKKWANETSLFRTCDPSNTTGFKYGLFGDAVEKHVVSSTFLEKYFYCLWW
GLQNLSSYGQNLSTSTFIGETSFAILIAIMGLVLFAHLIGNMQTYLQSITVRLEEWRLRR
RDTESWMRHRQLPHDLQERVRKFVQYKWLATRGVDEESILRNLPSDLRRDIQRHLCLDLV
RRVPFFSQMDDQLLDAICERLVSSLSTQHTYIVREGDPVSEMLFIIRGRLDSSTTNGGRT
GFFNSITLRPGDFCGEELLAWALLPKSTLNLPSSTRTVRALSEVEAFALRAEDLKFVANQ
FRRLHSKKLQHTFRFYSYHWRTWAACFIQAAWRRIKKRRMQWNLSMSESSYRPDDDDDEH
QQSHVSEHHEEASLNSAQQNLNVTILASRFAANTRRGILKTKDVDMIKLQKPEEPDFSAD
PDDE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggacttcaagactggaaagcaagtcaggttttacaccggagaaaatggaaagtcaaac
tatgatcattcttggcaactgccagacaaacaagtgcctgaacacaaggtttcggcccca
ttgttgatgaataatggtaaaggtagaaactttcctacattaaatcatatgggtataaaa
ttaggaaaatacccagatgagaatagtaatgattcaaaaggaaaaaaggttttggatcct
ggaagtgaaattatattgcaatggaataggatttttttattttcttgtttagtggcactt
tttgtggatccattgtttttttatttgccatctgtacagaataaagatgaggacgagtct
gcttgtatgttgtcggatttgaatttaggaattattgttacatgtttgcgtactatggcg
gatatattttatatgttgaatatagttataaagtttaggactgcttatgtttcgccaagt
tcaagagtgttgggtagaggtgaacttgttatggatctggataagattgcacgacggtac
ttgaagtcgaatttctttattgaccttgttgcaacattgcctttacctcagattgtcata
tggttcatcatcccggcaataagaacacccagagctgatcacaccaccaatgctttagta
ctaattgtccttctccaatatattccaagactctatctcatttttcctttgagctcccaa
atcatcaaaactacaggagttgtcaccaaaactgcatgggccggggctgcatataatctt
gtgttatacatgttagctagccatgttttaggagcatcatggtacttgttgtcatttgaa
aggcatgcaacctgttggaaatccacatgtcgacaaaataataattgtgtacttcgttat
ttggattgtggctcttcagacgacgatgaacggaagaaatgggccaatgaaacaagtctt
tttcggacttgtgatcctagcaacactacaggtttcaagtatgggctatttggagatgct
gttgaaaaacatgttgtctcctccactttcttggaaaaatacttctattgcttatggtgg
ggcttacaaaacttaagttcatatggacaaaatttgtccaccagtacctttattggagaa
acatctttcgccatactcatcgccattatgggacttgttttatttgcccatctaatagga
aatatgcagacctacttgcaatccatcactgtgaggcttgaggagtggaggcttagaagg
cgagacacagagtcatggatgagacatcgacagctacctcatgacctgcaagaacgtgtg
cgtaaatttgtacagtataaatggcttgcaacacgaggagttgatgaagaatctattttg
cgtaacttaccttcagatctccgtcgagacatccaacgccacttgtgtcttgatcttgtt
agacgtgtcccctttttctctcaaatggatgatcagctacttgatgctatatgtgaacgt
ttagtgtcatcactaagtactcaacatacatacatagtacgtgaaggtgatcccgtatca
gagatgctttttatcatccgaggaagacttgatagttccaccacaaatggaggccgaact
ggttttttcaactccattactttaaggcctggcgacttttgtggtgaagagttacttgca
tgggctttacttccaaaatccaccttaaatctaccgtcttctacaagaaccgtaagagca
ttaagtgaagttgaagcttttgcattacgtgcagaagatctcaaattcgttgcaaatcag
ttcagacgtttacatagtaagaaactacaacatacatttcgtttctactcataccattgg
agaacgtgggctgcgtgtttcattcaagcagcttggcgccggatcaagaagagaagaatg
caatggaaccttagcatgagtgaatcatcatatcgtcctgatgatgacgatgatgaacat
caacaaagtcatgtatctgaacaccacgaagaggcatcattaaattcagcccaacagaat
cttaatgtgacaatattagcatcaagatttgctgcaaacacacgacggggaatcttgaaa
acgaaggatgttgatatgattaagctgcaaaagcctgaagaacctgatttctcggctgat
cctgatgatgaatag
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