Erigeron canadensis (horseweed): 122599705
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Entry
122599705 CDS
T07610
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122599705
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecad04812
]
122599705
Enzymes [BR:
ecad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
122599705
Membrane trafficking [BR:
ecad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
122599705
Cytoskeleton proteins [BR:
ecad04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
122599705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
AAA_16
AAA_22
NPHP3_N
AAA_14
TIP49
Mg_chelatase
AAA_25
DUF815
MCM
AAA_2
Vps4_C
bpMoxR
IstB_IS21
ABC_tran
RNA_helicase
nSTAND3
AAA_7
AAA_24
AAA_17
AAA_33
MIT
AAA_28
Guanylate_kin
nSTAND_NTPase5
PhoH
AAA_19
AAA_18
Sigma54_activat
AAA_30
Motif
Other DBs
NCBI-GeneID:
122599705
NCBI-ProteinID:
XP_043628191
LinkDB
All DBs
Position
5:complement(44843822..44849092)
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AA seq
496 aa
AA seq
DB search
MAGFFKDLINSLFSDPISPSSSSSSNNFNNNNNKLSVGSGGGMEGSVENEKIAYKLKGYF
ELAKEEIDKAVRAEEWGLINDAITHYNLSQRILSEAISTPVPTYISSREQEKVKTYRQKI
SKWQSQVSERLITLNRRSGGSSINKNKSPQLQTTAVLPLKSNATKVVPQKPSGPSLRSTS
NVTRTQSNKAMNSKPVHESNDGLDPKLVEMINSVIVDRSPSVKWEDIAGLEQAKQALLEM
VILPTKRKDLFTGLRRPAKGLLLFGPPGTGKTMLAKAVASESQATFFSISASSLTSKWVG
EGEKLVRTLFAVAVSRQPSVIFMDEIDSVMSARTSSEHDASRRLKSEFLVQFDGVTSNSN
DLVIVIGATNKPQELDDAVLRRLVKRIYIPLPDANVRRDLLKHKLKGQAYSLPSGDLQRL
VKDTEGYSGSDLQALCEEAAMMPIRELGSNVLTVKADQVRRLKYGDFQKAMTVIRPSYVK
SKWEELERWNKEFGSN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggctggttttttcaaagacttgatcaactcgttattttccgacccaatttcaccctct
tcttcctcctcctctaacaatttcaataataataataataagttgtcagtaggatctggt
ggggggatggaaggaagcgtagaaaatgaaaagatagcatataaattaaaaggatatttc
gaactggcaaaagaagaaatcgataaagcagttagggctgaagaatggggcttaattaat
gacgctattactcattataatctctctcaacgtattctttctgaagctatttctacacct
gtccctacttatatcagttccagagaacaagagaaggttaaaacttatcggcagaagata
tcaaaatggcagagtcaagtttctgagagactaattactttaaaccgtcgatcaggtggc
tcatcaataaacaagaacaaatcacctcagttacaaactactgcagttctcccattaaag
tccaatgctacgaaagtggtgccacaaaagccttctggtcccagtttacgtagtactagt
aacgtgacacggactcagagtaacaaagcaatgaattcaaagcctgttcacgaatctaat
gatggtcttgacccaaaattggttgagatgatcaattctgttattgtagatagaagtccg
tctgtcaaatgggaagatattgctggccttgaacaagctaaacaggctttgctggaaatg
gtaatcctgccaactaaaagaaaagacctatttactggccttcgtagaccagctaaaggt
ttacttctttttggtccacctggcacgggtaagaccatgcttgccaaggcagttgcttca
gaatcccaagcaaccttttttagcatctctgcttcctctttaacatcaaagtgggtggga
gagggtgaaaaacttgttcggacccttttcgcagttgctgtttctagacaaccctctgta
atattcatggatgaaattgatagtgttatgtcagcaagaacatctagtgaacatgatgct
agcagaagattaaagtcagagttcctagtccagtttgatggggtgacttcaaactcaaat
gatctagttattgtcattggtgcgacaaataagccacaagagttagatgatgctgtactt
aggagattggtgaagagaatatacatccccttaccagatgcaaatgttcgaagagatctc
ctgaagcacaagctcaagggtcaagcatattctttaccgagtggagatctgcaaagactt
gtgaaagacaccgagggatattctgggagtgatctgcaagctttgtgtgaggaagcagca
atgatgcctataagagaacttggttcgaatgttctcactgtcaaggctgatcaggtgcga
cgattaaaatatggagatttccaaaaagcgatgactgtcattcgaccgagctatgtaaaa
agcaagtgggaagaacttgagcggtggaacaaagaattcggctctaattaa
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