Erigeron canadensis (horseweed): 122599717
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Entry
122599717 CDS
T07610
Name
(RefSeq) EIN3-binding F-box protein 2-like
KO
K14515
EIN3-binding F-box protein
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04016
MAPK signaling pathway - plant
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122599717
04075 Plant hormone signal transduction
122599717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122599717
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122599717
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box
F-box-like
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
122599717
NCBI-ProteinID:
XP_043628205
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Position
5:2589691..2592472
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AA seq
621 aa
AA seq
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MPTLVGGDELYKRGAFCSMDPARLFSVLDVYSRPCKRLQISEPRRFYYNEEKNPSIEVLP
DECLYEIFRRLSGGQTRSISACVSKRWLMILSNVRNSDSEPNKVNTSLKDEQENDGYLTR
SLEGKKATDTRLGAIAVGTSPRGGLGKLLVRGSSEVTSIGFAAIARGCPSLKVLSLWNVS
LIGDEALIEISKECHSLESLDLSQCPLISSKGLAAIAKNCPRLCYLTLESCQSIGNEGLE
AVAQGCLNLQSITIKDCPLIKDQGIATLISNSLVLTKLKLQALDITDLSLAVIGRYGKSI
TNLALTSLRTVTKKGFWAMGISKNLESLTSLTVISCHGVTDLSLEAIGHGCRVLKHMALK
KCCFVSDKGLVSFAKAACFLESLHLEECNRISQHGILGTLSHPNAKLKALSVVKCMGIRD
LEQEPVGLSKSQSLRSLTIKNCIGFGNTNLATLGKLCPHLHSLDLTGACRINDTGLSKLL
KACTGGLLNVNLTDCINLTDEVVVDLAKTHGRTLEVLNLDGCRKIGDESLAAIAENCLLI
KDLDVSKCGITDSGVSCLSNGCINLQVLSLSGCPRISNESMISLELLGKTLVGLNLQRCS
LISSSVIESLVANLWRCDILF
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcctactttggttgggggtgatgaactttataagagaggggcattttgttccatggat
ccggcccgtttgttttctgttcttgatgtttacagccgaccttgtaaaaggctacaaata
agtgagcctcgcagattctattacaatgaagaaaagaatccatctattgaagttctgcca
gatgaatgtctatatgagatctttaggcgtttatccggtggccaaaccagaagcatttct
gcttgtgtatcgaagcgttggcttatgatcttgagtaatgtacgaaactcagatagcgag
ccaaataaagtcaacacgtcattaaaagatgaacaagagaacgatgggtatcttacaagg
tctttagaagggaagaaagcaactgataccagacttggtgccattgcagttggtacctct
ccccgaggtggtttgggcaagcttttagtcagggggagtagtgaagtaacaagtattggt
tttgcggcaattgcccgtggctgcccatctctaaaggttctttctttatggaatgtttct
ttgataggagacgaagctttaatcgagatctctaaagaatgccattcattagaaagtctt
gatctttcccaatgtcctttgatttccagtaagggtttggctgcaatagcaaaaaactgc
ccgcgtttgtgttatctaacactagagtcttgtcaaagcattggaaatgagggccttgaa
gctgttgcccaaggctgcctgaatctacaatcgattacaatcaaagactgcccacttatt
aaagaccaaggaatagccactctaatatcaaattctttggttcttacaaagttaaagctt
caagctttagacattactgacttgtcactagcagttatcgggcgttatgggaagtcaatt
accaaccttgccctcacgagcctccggaccgttactaagaaaggcttttgggcaatgggt
atttcgaaaaaccttgaatctttgacatccttaacagtaatttcgtgtcatggtgtcaca
gacttgagccttgaagctattggacatggttgtcgagttttgaaacacatggctcttaaa
aagtgttgttttgtgtctgataaagggttagtttctttcgctaaagctgcctgttttctc
gaaagtttgcacttagaagagtgtaataggatcagccaacatggaatattgggaacttta
tcgcatccaaacgcaaagttgaaagctttatcagttgtgaagtgtatggggatcagagat
ttggagcaagaaccagttgggttgtccaaaagtcaaagtttacgatctttaacgatcaag
aactgcattgggtttggaaacaccaacttagcgactttggggaagttatgtccacatctg
catagtcttgatttaactggggcttgcaggataaatgatactggcctttcaaaacttctc
aaagcctgcacgggtggacttttaaatgtcaatcttactgattgcataaacttgactgat
gaagttgtggtagatttggctaagacccatggcagaaccctggaagtgctaaatctggat
ggatgcaggaagattggtgacgaaagcttggctgctattgcagaaaactgcttgttaatt
aaagatcttgatgtttcaaagtgcggcattacggattcaggtgtttcttgtttgtctaat
gggtgtataaacttgcaggttctttcgttatcgggttgtccaaggatttctaatgagagt
atgatttctcttgagttgttgggaaagacccttgttgggttgaacctccaaagatgcagc
ttgataagtagtagtgtcatcgagtcacttgtggcaaatctttggagatgtgatatactt
ttttaa
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