Erigeron canadensis (horseweed): 122599752
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Entry
122599752 CDS
T07610
Name
(RefSeq) syntaxin-32-like
KO
K08490
syntaxin 5
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122599752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122599752
Membrane trafficking [BR:
ecad04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
122599752
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
BOS1_GOSR2_MEM11-like_N
Syntaxin-5_N
DegR
T7SS_assoc-like
DUF3141
Motif
Other DBs
NCBI-GeneID:
122599752
NCBI-ProteinID:
XP_043628247
LinkDB
All DBs
Position
5:1975432..1981218
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AA seq
351 aa
AA seq
DB search
MKSAQASSYRDRTHEYSSIVDRLKKSLPSSSSSNAVVPFNSSGGSGSGGGGSGKAEGSRS
AIAFQSEFNKRASKIGYGIHHTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVIKQDITAL
NSAVVDLQLVCNSQNQSENVSSDTTTHSTTVVDNLKNRLMSTTKEFKDVLTMRTENLKVH
ENRRQLFSATTTKETANPFVRQRPLASKSTASASNSPPPWANDSSNSSPLFQRKHADGES
QPLIQQQSQQQQQMVPLQDSYMHSRAEALHNVESTIHELGSIFTQLATMVSQQGELAIRI
DENMEDTLANVEGAQGQLMRYLNSISSNRWLMIKIFFVLIAFLMIFLFFVA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagcccaagcatcttcatatagagatcgaacacatgagtattcaagtatagtt
gataggttaaaaaaatcactgccttcttcttcttcttcaaatgcggttgttccgtttaat
agcagcggcggttccggtagcggtggcggtggttccggtaaggcggagggatcgcgatcg
gctatcgcttttcaatcggaatttaataagagagcctctaaaattgggtacggaattcac
catacatctcagaagctagccaagcttgctaaattggcaaagaggacatctgtttttgat
gatccaactatggagatccaagagctgactgctgtcatcaagcaggacattactgcactt
aattcagctgtggtggatttgcagcttgtatgcaattcccaaaaccaaagtgaaaatgtt
tctagtgacaccaccacccattcaactacggtggtagacaatctgaagaaccgtttgatg
agcaccacaaaggagttcaaggatgttctaaccatgagaactgagaacttgaaggttcat
gaaaacagaaggcagttattttcagcaactaccactaaagaaactgctaatccatttgtc
cgtcagcgtcccttggctagtaaatcaaccgccagtgcatcaaattctcctcctccatgg
gctaatgactcttcaaactcttctcccctgtttcaaaggaaacatgcagatggtgaatct
cagccgttgatacaacaacaaagtcagcagcaacaacagatggttccattacaagatagt
tacatgcacagcagagctgaagctcttcacaatgtcgagtcaactattcatgagttaggc
agcatattcacacaattggcgaccatggtttcccagcaaggggagcttgcaatcagaatt
gatgagaacatggaagatactctggcaaatgtagaaggtgctcaaggacaactaatgaga
tacctcaacagtatatcatccaatcgatggctgatgataaaaatattctttgtattgatt
gcatttctcatgatttttctcttcttcgttgcgtaa
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