Erigeron canadensis (horseweed): 122599759
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Entry
122599759 CDS
T07610
Name
(RefSeq) pumilio homolog 24
KO
K14844
pumilio homology domain family member 6
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122599759
03009 Ribosome biogenesis [BR:
ecad03009
]
122599759
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122599759
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122599759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF_NOP9
CPL
PUF
Motif
Other DBs
NCBI-GeneID:
122599759
NCBI-ProteinID:
XP_043628259
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All DBs
Position
5:37576381..37582055
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AA seq
678 aa
AA seq
DB search
MGFKKDSSSKKRKTPTKGGGDGGKFSPKKKLKTPPTSSDTTTQQLKNKPFKKPFSKTVGG
DGGGFGKPKFNNKQDVAHDAPKTKKELRIQAKELAEARKKKRRPHYTLEQELASLWEKMR
RRNIAKEDRSKLVSEGLKKMKGKIPEIAGSHVSCRVLQTCAKYCSQDERNAVYAELRPHF
LSLACNTYAVHLITKLLDNASKEQLADFISSLRGHVAPLLRHMVGSVVAEHAYQLGNATQ
KQSLLMELYSTELQLFKDLALVKERRIVDIISKLNLQKSAVVRHMSAVLQPILEKGIVDH
SILHKTIVEYFTIADKTSAADVIQHLASALLVRMIHTKDGSKIGILCVKHGSAQERKKIT
KGMKGHVSKIALDRFGSMVLTCILSVVDDTQLVKKIIIRELQAVLKELILDKNGRHPLLQ
LLHPNCSRYLSPDDLSLLDSSIPSLVVKSESELETKVKSSEAEGDEDMSDTEALGGSGPN
AEVKSPGAEGDEDMSDANENVKSIAGGKKDPILRRRELLVDSGLAESLIDACSESVEELL
RSNFGKEVLFEVASGGADGILHPHLDEKLKSLHEAIASKVAIPKSEGQEEEHLLENFHSS
RTIRKLILECPSFATILWEKVFKGKCKTWAQGHSAKVVCAYLETSDPKVLKLTKKELKPL
LDKGVLKLPEQSQTKKAD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggggttcaagaaagatagcagcagcaagaaaagaaagacacccacaaaaggcggcgga
gatggaggcaaattcagtccaaagaagaaactaaaaacaccacccacttcatcagacaca
acaacacaacaactaaaaaacaaaccttttaaaaaaccatttagtaaaactgttggtggt
gatggtggtggttttggtaagccgaagtttaataataaacaagatgtagctcatgatgcc
ccgaaaactaaaaaagaacttcgtattcaagccaaggagcttgctgaagctaggaagaaa
aagaggaggcctcattatacacttgagcaagagcttgcttcactatgggaaaagatgagg
cgccgcaatattgcaaaagaagatagatcaaagttggtgagcgagggtttaaagaagatg
aaaggcaaaattcctgaaattgcaggctcccatgtttcttgtcgtgtacttcagacatgt
gccaagtattgttcacaagatgaaaggaatgccgtttatgcggaacttcggccacacttt
ctcagccttgcttgcaacacctatgcagtgcatctaattacaaagctgttggataatgcc
tcaaaggaacaactggcggactttatttcttctctgcgtgggcatgttgctcctctttta
cgccatatggttggttcagttgttgctgaacatgcttatcaattgggaaatgctactcaa
aaacaatctcttctcatggaattatattctaccgagcttcagttatttaaagatctagct
ttagtgaaagaacgcaggatagtggatataatttccaagctgaatttgcaaaaatcagct
gtagtgaggcatatgtctgctgtgcttcaaccaattctggagaaagggatagtagatcac
tctatcttacacaagacaattgtagagtactttacaattgctgacaagacctctgctgca
gatgttattcaacatttagcaagtgcacttcttgtgaggatgattcatacaaaggatgga
tccaagattgggattctctgcgtcaagcatggcagtgctcaggaaagaaagaaaatcact
aaaggaatgaagggtcacgtcagtaagatagctttagatagatttggcagcatggtgctt
acatgtattctatcagttgttgatgatacacaattagttaaaaagattatcattcgtgaa
ctccaagcagtactgaaggagctgattttagataagaatggaaggcaccctttattgcaa
cttcttcatccaaattgctcgcgttatctcagtccagatgatttatctttgttggattcg
tctataccttcattagttgtcaagagcgaatcagaactcgaaaccaaagtaaaatcttca
gaggctgaaggtgatgaagacatgagtgatacggaggctttgggtggatcaggacccaat
gctgaagtcaaatccccgggggctgaaggtgatgaagacatgagtgatgcaaatgaaaat
gtaaaatctatagcgggtgggaaaaaagatcccattttaagaagaagagagttgttggtt
gatagtggacttgccgagagtctcattgatgcatgttctgagagtgtggaagagttactt
agatcaaattttggaaaagaggtcttgtttgaggttgcttcagggggcgcagacggcatt
ctccacccacatttggatgaaaagttaaaatcgttacatgaagctatagcatctaaggtg
gcaatccctaaatcagaaggacaggaagaggagcatcttctggagaacttccattctagc
agaacaatcagaaaattaatactagaatgtccatctttcgcaaccattttgtgggagaaa
gttttcaaggggaaatgcaagacttgggcccaaggtcacagtgcgaaggtagtttgtgca
tacttggaaacttcagatccaaaggtgctaaaactgactaagaaagaactgaagcccttg
ctagacaaaggtgtgcttaaattaccggagcaaagtcaaacaaaaaaagctgactaa
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