Erigeron canadensis (horseweed): 122599762
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Entry
122599762 CDS
T07610
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute 16-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122599762
03036 Chromosome and associated proteins [BR:
ecad03036
]
122599762
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122599762
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122599762
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122599762
microRNA pathway
RISC loading complex
122599762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
PH_RBD
Motif
Other DBs
NCBI-GeneID:
122599762
NCBI-ProteinID:
XP_043628262
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Position
5:29085470..29094547
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AA seq
907 aa
AA seq
DB search
MEKANGEDDNGSTPMAPLLSSPSPQPEVIQPDMETEQETRPKRSVISRPGFGSAGKHISL
LANHFKVSVKNPEEIFYQYSVSVTSEDNRVIENKFLGRRIIDKLYQTYSSELSGKRFAYD
GEKSLYTVGPLPKNNFEFMVVLEDTYANRRSPAEDGILSEPGKRLRHSFQEKTFKVKITY
AAELPLNPVSLGLQGADPDKLGDTLRVLDIILRQQAAQRGCLLLRQSFFHDDSRNFSDVG
GGVTGCRGFHSSFRPTLDGLSLNMDVSNTLILTPGPVIDFLKANQKARDARSIDWVKAKK
TLKNLRIKTTHSNREFKITGMSEKPCNQQLFPMRVKKDDGTYDDQTINITVFDYFTKHRN
IEVTYSAYIPCIDVGKPKKPSYFPVELCSLVSLQRYTQALSTMQRASLVESSRQKPREKM
QAIADGMKNYHYDDDPLLVSCGISIDKQLAQVDGRVLEAPMLKAGNGEEFIPRNGRWNFS
KKKLLSPIKIQNWAVANFSARGDASHLSRELIDCGRSIGIIIDRPFSLMEEDPQNRKKGP
EVRVERCLISFQQSSRFSDFLLCILPERKSCDLYGPWKKKCLSDHGIPTQCVCPVKITGQ
YLTNVLLKINTKLGGINSLLAIEQSSRIPIIHDTPTMIMGMDVSHGSAGQSDIPSIAAVV
GSHSWPLISRYKASARSQSSKVEMIQGLFELLEDGEDKGMMRELLLEFYRTSNNRKPTQI
IVFRDGVSESQFNQVINIELDQMIKAYQYLDGVDVPKFTVIVAQKNHHTKLFQANGPENV
PPGTVVDSKVVHPRNYDFYMCTQPGLIGTSRPAHYHVLIDEIGFSPDALQSLILSLSYVY
QRSSSTTSIVAPVSYAHLAAQQMGRFLKFNDSFENRSGMDSLTSVGSVPIPELPKLHEDL
ENSMFFC
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcaaatggtgaagacgataatggctccacacccatggcacccttgctatca
tcgccatcaccacagccagaagttatacagccagacatggagacggagcaagaaacccgt
cccaagcgttccgtaattagtaggcctggatttggaagtgctggaaagcacatttcgttg
cttgctaatcatttcaaagtttcagtcaagaatccggaggagatattttaccagtacagt
gtatctgtcacttctgaagataacagagtaattgagaacaaatttttggggagaagaatt
atcgacaagctttaccaaacatactcctctgaactttctggtaagaggtttgcatatgat
ggagaaaagagcctttatactgtcgggcctctcccaaaaaacaacttcgagttcatggtt
gttcttgaagatacatatgcaaaccgcagaagccctgctgaagatgggattcttagtgaa
cccggtaaaaggttaaggcactcttttcaggagaagacttttaaagtaaagattacttat
gctgctgaactaccgttaaatcctgtttctcttggccttcaaggagcagatcctgataaa
ctcggagatactttgagggttcttgatatcattttgagacaacaagctgctcaaagggga
tgtcttctattaaggcagtcattctttcatgatgactctaggaacttcagtgatgttgga
gggggtgtcactggctgccgtggattccattctagttttcgtccaacacttgatggtttg
tcattgaatatggatgtatcaaatactctgattcttactccaggaccagtgatcgatttt
ctaaaagctaaccaaaaagcacgtgatgctcggtctattgactgggtgaaggccaagaaa
acacttaaaaacttgagaattaaaacaacacacagcaacagggaatttaagatcacgggg
atgagtgaaaagccttgcaatcaacaactgtttcctatgagagtgaaaaaagacgatggt
acatacgatgaccagacaataaacattacagtatttgattatttcaccaaacatcgtaac
attgaagttacgtactctgcatacataccatgcattgatgttggtaaaccaaagaagcca
agctattttcctgtggagctctgctctcttgtttcacttcaacggtatacgcaggcctta
tctacaatgcagagagcatctctcgttgaaagttcaaggcaaaaacctcgagagaaaatg
caagctatagctgatggtatgaaaaactatcattacgatgatgaccctctactagtttca
tgtggaatatctattgacaaacaacttgctcaagtggatggccgtgtccttgaagcacca
atgttgaaggctggtaacggagaagaatttatccctcgtaatggacgatggaactttagc
aaaaagaaacttttaagtcccataaaaatacaaaactgggcagttgccaatttttctgcc
aggggtgatgcaagtcatctatcgcgggagctcatagactgtggaaggagtataggaatt
attattgatcgcccattttcactaatggaggaagacccacagaatcgaaaaaaaggtcct
gaagtacgcgtagaaagatgtttgatcagctttcagcaaagctcccggttttctgacttt
cttctttgcattttaccagagagaaaaagttgtgacttatatggtccttggaagaaaaaa
tgtttaagcgaccatggaattcccacacaatgcgtgtgtcctgtcaagatcactggtcaa
tatctcacaaatgtgcttttgaaaattaatacaaagcttggtgggatcaattctttgtta
gcaatagaacagtcgtctcgtatacccatcatacatgatactccaacaatgataatgggt
atggatgtctcacatgggtccgcaggtcaatccgacataccatcaattgctgcggttgtt
ggatcccattcatggcctttgatatcaagatataaagcatctgctaggtctcaatcatcg
aaggtggaaatgattcaaggtttatttgaactgctagaggacggagaagacaagggcatg
atgagagagctacttcttgaattttatcgaacaagcaataaccgtaaaccaactcaaatt
attgtattcagagatggagtgagtgaatcccagttcaatcaagtgataaatatagagttg
gatcaaatgatcaaggcataccaatatcttgatggggttgatgttcctaagttcactgtc
attgtggctcaaaagaatcatcacacaaagcttttccaagctaatggccctgaaaatgtc
cctcctggtaccgtagtagacagtaaagtggttcacccaagaaattatgatttttacatg
tgtactcaaccgggattaattggtacttctcgtcctgcccactatcatgtcttgattgat
gagattggtttctctcccgatgccctgcagagtttaattctttcactatcctacgtgtat
caaaggagtagctcgacaacttcaatcgttgcacctgtatcgtacgctcatcttgccgcc
caacaaatgggccggtttcttaagttcaacgattcatttgaaaatcgttctggaatggac
agcctcacttctgtaggaagtgtacctattcctgagctgccaaaattgcacgaagatctt
gagaactccatgttcttttgttga
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