Erigeron canadensis (horseweed): 122599786
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Entry
122599786 CDS
T07610
Name
(RefSeq) cyclin-T1-3-like
KO
K15188
cyclin T
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122599786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122599786
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
122599786
Brd4/P-TEFb complex
122599786
7SK RNP complex
122599786
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_N
CycT2-like_C
Cyclin_C
Cyclin_C_2
RE_TaqI
Motif
Other DBs
NCBI-GeneID:
122599786
NCBI-ProteinID:
XP_043628299
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All DBs
Position
5:36705429..36712613
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AA seq
513 aa
AA seq
DB search
MAALLSNDSMHFAMHEGGPHNQSNNHHEENSGRWYFSRKEIEENSPSRSDGIDLKKETYL
RKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHGKNDRRTVATVCMFLAGKVEET
PRPLQTVIIVSYEINYKKDPKLAQRIKQKEVYEQQKELILTGERVVLATLAFDFNVHHPY
KPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPS
DGEKVWWQEFNVTPRQLEEVSNQMLELYEQNKLPPSTGGGVTQKPRAPEVNQEHGTNDSD
SHVGAATSRSHTSNLASSRPTSDHPRTSQDQSNDDGSTDRNKDINSDVENNDDQHYESEI
GETKSTCGPTKHAEEDEERGGGILEYRSQTPKDAIKKIDKDKVRGLRAALEKRKKARGGD
VTRRTDFMDDDDLIERELEDGIELAVESEKSKLGTNDFSKPSKLIDDDFDSDLVEEGEVG
MLDEGDMRGTSPTASSRKRKAGGTPPPDKRRRN
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggctgccttgttgtccaatgattcgatgcattttgcaatgcacgaaggcggtccccat
aatcagtctaataatcatcacgaggaaaatagtggtcgctggtatttttctaggaaagaa
atagaagagaactcaccatcgagatcagatggcattgatctgaagaaggagacatatctg
cggaagtcgtattgcacgttcctgcaggacttgggtatgagacttaaagtgccccaagtt
accattgcaacagctattatcttttgtcaccgcttcttcattcgtcagtctcatgggaag
aacgacaggaggacggtggcaacagtctgcatgtttcttgccggcaaggttgaagaaact
cctcgtcctttgcaaactgtcattattgtttcctacgaaatcaattacaaaaaggaccct
aagttagcacagagaatcaaacagaaggaggtgtatgaacaacagaaagaattaatctta
acaggggaacgtgtagtccttgcaactcttgcttttgacttcaatgtgcaccatccatat
aaaccacttgttgaggcaataaagaaattcaaagttgctcaaaatgcacttgcccaagtt
gcatggaatttcgtaaatgatgggcttcggacatctctctgcttgcaatttaagccccat
cacatagcggcaggtgccatttttcttgctgctaagtttctcaaagtaaagctgccatca
gatggcgagaaggtttggtggcaggaattcaatgttaccccacgccaattagaggaggtg
agtaaccaaatgttagagttgtacgaacaaaataaattgccaccatccacaggaggcggg
gttactcagaagccacgagctccagaggttaaccaagaacatggcacaaatgacagcgat
tctcatgttggtgctgctacttccagatcacatacctcaaaccttgcatcatcaagaccc
acttcggatcatccaagaacatcccaagatcaaagtaatgacgatggaagtacagataga
aataaggatatcaattcggatgttgagaacaatgatgaccagcattacgaatcagaaatt
ggtgaaacaaaatcaacatgtggtccaactaaacacgccgaggaagatgaagaaagaggc
ggggggattctggaatacagaagtcagacgcctaaggatgccataaaaaagatagataaa
gataaggttaggggccttagggcagctcttgagaaacgaaagaaagcacgtggtggtgat
gtaactcgaagaacagatttcatggatgacgatgatctgattgagagggaactagaagat
ggtatagaattggctgttgaatctgagaaaagcaaactaggaacaaatgatttttctaaa
ccttcaaagcttattgatgatgattttgattctgatctagtggaagaaggggaggtggga
atgttggatgaaggtgacatgagagggacgtcacccacggctagtagccggaaaaggaaa
gctggcgggacaccgccacctgacaaacgaagaagaaactag
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