KEGG   Erigeron canadensis (horseweed): 122599795
Entry
122599795         CDS       T07610                                 
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16-like
  KO
K14791  periodic tryptophan protein 1
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ecad03009]
    122599795
Ribosome biogenesis [BR:ecad03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    122599795
  Pre-60S particles
   Other pre-60S particles
    122599795
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR3_2nd WD40_RFWD3 WD40_WDHD1_1st WD40_Gbeta Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_WDR35_TULP_N WD_LRWD1 Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_WDR36-Utp21_2nd Beta-prop_DCAF12 WDR54 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 DUF4367 CD52
Other DBs
NCBI-GeneID: 122599795
NCBI-ProteinID: XP_043628316
LinkDB
Position
5:36226166..36231629
AA seq 506 aa
MISSISWVPKGASKPVPSAADPPSKEEIEEIKKAALLGKGFDVESEEGNEDDDEDMTAVD
ESTEQPDEIEQAIGAANALGKVSTKKTSGGSSSFSDIADGLDELNMDDYDDEDDDIDIFG
SGLGDTFYPSNELDPYLKDKGDDEDSEELEDIMIKADDAVLVSTRNEDDMSYLDVWIIED
PDGDSNAYVHHDILIPAFPLCTAWLDCPIKGGEKGNFIAVGSMEPSIEIWDLDIVDEVQP
SLILGGYSEKKKKKKGKKTEKSIKYKKDSHTGAVLSLAWNKGFRNILASASADKLVKVWD
VATGDCKLTMNHHTDKVQAVAWNHHEHEVLLSGSFDHTVVMRDGRKPTHTGFKWLVGADV
ESLAWDPHDQHSFVVSLENGTILGFDIRTAASNSSTELKPTFTIHAHDKAVCAISYNPLV
PNLIATGSEDKMVKLWDLSNNQPSCLASQNRKAGAVFALSFLEDCPFLLALGGSKGKLEL
WDTLSDATISKRYGKYARQDKAPAST
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgatatcatcaatatcatgggttccaaaaggagcctcaaaacctgtcccatctgcagct
gaccctccttctaaagaggaaattgaagagattaaaaaagcagccctcttgggaaaaggt
tttgatgttgaaagtgaggaaggtaatgaggatgatgatgaagatatgactgctgttgat
gaatcaacagaacagcctgatgaaatcgagcaggcgataggtgcagctaatgcacttggt
aaggtttctacaaagaaaactagtggtggctccagcagcttctccgacattgcagatggg
ttggacgaactaaacatggatgattatgatgatgaagatgatgacatcgacatatttggt
tcggggcttggggacacattctatccgagcaatgagttagacccttatctgaaggataaa
ggcgatgatgaggattctgaggagcttgaagacattatgatcaaagctgatgatgctgtt
ttagtttctacacgtaatgaggatgatatgagttatctagatgtatggataatagaggat
cctgatggtgattcaaacgcatatgttcatcatgacattcttatcccagcatttccatta
tgcacagcatggcttgattgcccaattaaaggtggcgaaaaagggaattttatagcagtt
ggctcaatggaaccatcaatcgaaatatgggatcttgatattgtggatgaagttcaacct
tcactaatactaggtggttattctgaaaagaaaaagaagaagaaaggaaagaagaccgag
aaatctatcaagtacaaaaaagatagtcacacaggtgcagtacttagtcttgcttggaac
aaaggctttaggaatattcttgcgagcgctagtgctgacaaactagtgaaggtttgggat
gtagctactggcgattgtaaacttaccatgaatcaccatactgataaggttcaagcagtt
gcatggaatcatcatgagcatgaagttcttctcagtggatctttcgatcatacagtagtt
atgagggatggaaggaaacctactcatactgggtttaagtggcttgttggtgccgacgtt
gaaagcttggcatgggatccacatgaccaacattcatttgtggtgagtctcgagaatggt
acaattcttggttttgatatcagaacagcagcatcgaattcatccacagaattaaagccg
acgtttactatccatgcacatgataaagctgtttgtgctatttcgtataaccctctggtg
ccaaatcttattgcaactggttctgaagacaaaatggtcaagctatgggatttgtcaaac
aaccaaccttcgtgtttagcctcacagaatcgtaaagcaggagctgtttttgccttgtct
ttcttggaagactgtccctttttgcttgctcttggtggttctaaaggaaaattggagtta
tgggacacattatccgacgctaccatttcaaaaagatacgggaaatatgccaggcaagat
aaggcacccgcttcaacatga

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