Erigeron canadensis (horseweed): 122599818
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Entry
122599818 CDS
T07610
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122599818
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122599818
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
122599818
NCBI-ProteinID:
XP_043628337
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Position
5:complement(7118470..7125920)
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AA seq
437 aa
AA seq
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MSSVNEPTTESPETHIESPETHTESPETHTESINAAVETEQKVEPPLPEKKWPGWPGDCV
FRLVVPVVKVGSIIGKKGDQIRKICEKTKACIRILNAPVSVPDRIVLISGKEDTDAPLSS
AMDAVVRVFKCVNGFPENDGDGAATIPSCSIRLLVQSMQAMSLIGKQGSSIKTIQESTGC
SIRVVPSEELSRVYTSSDSKIVDLQGEALKVLKALEAVLGHLRKFLVDRSVLPLFEIAHD
PSATQEHQLETWAEKSLVHTGSYSRVDSPLSVKRESLYLDRESQRESRYSSSGVLYYGRE
TGLSRTHSPAHGRTSAFVTQVAQTMQIPLVYTDAVIGLGGRNIAYVRQTSGATLTIKDSQ
GLPDEMTLELKGTLSQVQTAQQLIEDFIDNHKESKPSGYGRMDPSSRSQYSDSSYSRRSY
DKYRTSGVDDDYRRYRM
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagtcaacgaacccaccacagaatcccccgaaacccacatagaatcccccgaa
acccacacagaatcccccgaaacacacacagaatccatcaatgccgccgtagaaaccgag
cagaaggtggagccaccgttgccggaaaagaaatggcctggatggccgggagactgtgtg
tttaggctggtagttccggtggttaaagtgggaagtataattggaaagaaaggagatcaa
attcgaaagatttgtgaaaagaccaaagcctgcattcgtattcttaatgcccctgtttcc
gttcctgaccgcattgtcttaatatctggcaaggaagacacagatgcgcctttatcatcc
gctatggatgctgtagttagagtttttaaatgtgttaatgggttcccagagaatgatggt
gatggtgcagcaaccatcccgtcctgctcaatacgactactagtccaatcgatgcaagct
atgagtctaattgggaagcaaggatcttcaatcaagacaatacaggagagcactggttgt
tctattcgtgtggtccctagtgaggaattgtcaagggtatacaccagctcggatagtaaa
attgtggatctacaaggagaagctctaaaagttctgaaagctttagaagctgtgttaggt
cacctaaggaagtttttggttgatcgtagtgttctccccctgtttgaaatagctcatgat
ccctcggccacacaagaacatcaattggagacatgggctgaaaaatccttggtgcatact
ggttcatattcgcgggttgatagtcctctttcagtgaagagagaatcactctatcttgat
cgtgaatcccaacgagagtcgcggtattcttcatcgggggtcttatattatggacgtgaa
actgggttatccaggacacattctcctgcacatggtcggacgagtgctttcgtgacacag
gttgcccaaacgatgcaaataccactggtttataccgatgctgttattggtctcggagga
aggaatattgcgtatgttcgtcaaacaagtggtgctactcttaccattaaagatagccaa
ggtttaccggatgaaatgacacttgaactaaaagggacattgtcacaagttcagaccgct
caacaacttattgaggactttatagacaaccacaaagaatccaaaccaagtggttatggc
agaatggatccaagttctcgctctcagtactcagattcatcttatagtcgacgttcgtat
gacaagtatcgaacgtctggtgtagacgatgactatagacgttacagaatgtga
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