Erigeron canadensis (horseweed): 122599821
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Entry
122599821 CDS
T07610
Name
(RefSeq) myosin-2-like isoform X1
KO
K10357
myosin V
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122599821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122599821
04131 Membrane trafficking [BR:
ecad04131
]
122599821
03029 Mitochondrial biogenesis [BR:
ecad03029
]
122599821
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecad04812
]
122599821
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122599821
mRNA cycle factors
P-body specific factors
122599821
Membrane trafficking [BR:
ecad04131
]
Others
Actin-binding proteins
Myosins
122599821
Mitochondrial biogenesis [BR:
ecad03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122599821
Cytoskeleton proteins [BR:
ecad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122599821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
nSTAND3
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
122599821
NCBI-ProteinID:
XP_043628341
LinkDB
All DBs
Position
5:31531112..31538995
Genome browser
AA seq
1121 aa
AA seq
DB search
MSVVRSSLEEMLDSLQRNEECKNPADTPPALPARPASKARLPKRPLSSMFGVSPDIGQNV
KNNNVSFGRKKVACSGESPYTMLDTHEHRLAENGLAGLATRSSCSSDSGWDNSIEYYIKK
QLRVWCRLQNGQWESGKIQSSVGGKASVTLLDGTAVTVSTGELLPANAEILDGVDNLVGL
GYLNEPSVLCNLQYRYQRDVIYTMAGPVLLAINPFKDVSNSGSDAIMAYREKILDSPHVY
AVANAVYNDMMRDGVNQTIIISGESGAGKSVSANLAIEYLIEVGGEGREIACKIRETGCI
LEAFGNAKTSRNKNSSRFGKLIDIQYDARGTIQGAYIHTLLLEKSRISQLCRSERSYHVF
YQMCAGAPSDMRDKLNLRMANEYKLLNKSGCLKIHDVDDAQNFQKLMDAMNALRISHEDQ
ECIFKLLAAVLWLGNISFEVIDHENHVTVVADEASRTAAKLMGCKVDDLMVALSTNNSQS
LMLQQAIDTRDSMAQFVYTSLFNWLVEAINTSLEGSKEHSGRSISILDTYGFESLQKNSF
EQLLINYADERLHQHFVRHLFKLEQEEYDSEGIEWKKVDFIDNQGCLDIFEEKTEGILSI
LEEASNASEATLLTFASKIKQHLSSVLCFNDEKGTFTVPHYAGEVKYEMNGILEKNRDTL
QSNIIAFLLSCCKTFLTNKDVSDPDKQSIGSRFKGQLFKLIRLLEKSNPHFIRCIRPNAK
QLHGMYEKDIVLQQLRCSGVLETIKISKSRYPTRMKHQEFASRFGCLLVDKSLFHDPLST
SIAILQQYHVLPEMYQLGYTKIYFRAEQVSELEKLKKQVMQGACKVDKGRSGSRVICDFH
ELMLGIVTLQSFVRGENSRRKCNVSTKTSYQPTSKSPDNLIAVVHIQSVTRGWLARRYFS
HLLRWKKLDLDSPKTRQTSCSEVPEDKGLAPENLQHLPSKIEDLHKLVLSTKLSMSQKEQ
ENTALREQVRQFEAQWSEHEIKMKSVEETWQRQMASLQQKSLAAAKKSLGTEESGEDISA
TQNPAGNNGGVYDTVDHLSKDFEQTRQNFDNDAKALAEPKSVMPYSKQIEEFRKVKERFE
MWKKEYKNRLRETRAKLVKGLNREGGKQSWWGRLSKRYTPT
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtagttaggagttctttagaggaaatgttagattctttgcaaagaaatgaagag
tgcaagaatccggcagatacgccgcctgcattacctgcacggccggcgtctaaggctcgt
ctgcctaaacgccctttgtcgtccatgtttggtgtgtcaccggatattgggcaaaatgtt
aaaaataataatgtcagttttggccggaaaaaagtagcatgtagtggcgaatcaccttac
actatgctagatacacatgagcatagattggcggagaatggtcttgccggtcttgccacc
aggtcttcgtgctcatcggattccgggtgggataacagcatcgagtactatattaaaaag
caactccgagtctggtgtcggctccagaatgggcagtgggaatcaggaaagatacaatcg
tctgtaggaggaaaagcatctgttacacttttggatggaacagccgtgacagtgtctaca
ggagagctcttacctgcaaatgcagaaattctggatggcgttgacaatcttgtaggactt
ggttatctgaatgagccgtctgttctatgtaatctccagtatagatatcagcgtgatgtg
atttatactatggcagggcctgttttgttagcaattaaccccttcaaagatgtctcgaat
tctggaagtgatgctattatggcttatagggaaaagattttggacagccctcatgtatat
gctgtggccaatgctgtctacaatgatatgatgagagatggtgtaaatcagactatcatt
atcagtggagaaagtggagctggaaagagtgtatcagcaaatttagcaatagagtatttg
atagaagttggaggcgagggtagagagatagcatgcaaaattcgtgaaactggttgcata
cttgaggcttttgggaatgcaaaaacatcgagaaacaaaaattctagccgatttgggaaa
ttaattgacattcaatatgatgctaggggcacaattcagggggcatatattcatacactt
cttctcgaaaagtcaagaatatcccaactttgccgaagtgaacgatcataccatgtattt
taccaaatgtgtgctggggccccttctgatatgagagataaattgaatctaagaatggca
aatgagtacaagctcctcaacaaaagtgggtgcttgaaaatacatgacgtcgatgatgct
caaaattttcaaaagctgatggatgccatgaatgcccttagaatttctcatgaagatcaa
gagtgtatcttcaagttacttgctgctgttttatggttagggaatatatcatttgaagta
attgaccatgaaaatcatgttacagttgtggctgatgaagctagtagaactgctgctaag
ttgatgggttgcaaggtggacgacctcatggtggctctatctaccaacaatagtcaaagc
ttgatgttgcagcaggcaatcgatacaagagactcaatggcacagtttgtttacacaagc
ttgttcaactggcttgtagaagcaattaatacatcacttgagggaagcaaagaacatagc
ggaaggtctataagcattctcgacacctatggctttgagtctttacagaaaaatagcttt
gaacaactgctaataaactacgccgatgagaggctgcaccagcactttgttcgccatctc
tttaaacttgaacaagaggagtacgattcagagggcattgagtggaaaaaggtagacttt
atagacaaccaaggttgtttagatatctttgaggagaaaactgaggggatactatctata
cttgaagaggcttcaaatgcttctgaagccacattattgacctttgccagcaagatcaaa
cagcacttgagttctgttttgtgttttaatgacgaaaagggaacttttacggttcctcat
tatgccggggaggttaaatatgagatgaatgggattttggaaaagaacagagacacattg
caatctaatatcatcgcattcctcttgtcatgctgcaagacttttctaaccaataaagat
gtgtctgatccagataaacaaagcattggaagtagatttaagggtcaattgtttaagctc
attagactgttggaaaagtcaaatccacacttcattcggtgcataagaccaaatgctaag
caacttcatggaatgtatgaaaaagatattgtcttacaacaactcaggtgcagtggagtt
ttggagaccataaaaatctcaaaatctcgatatcctacacgtatgaaacatcaagaattt
gctagcaggtttggttgccttcttgtggacaagagtctttttcatgatccattaagtaca
tcgattgctattctgcaacaatatcatgtcctcccagaaatgtaccaacttggatataca
aaaatatattttcgtgcggaacaagttagcgaattggagaaattgaaaaaacaagttatg
caaggagcatgcaaggtggacaaaggcagatctgggagcagggttatttgtgactttcat
gaactaatgttgggcatagtcacattgcagtcatttgttcggggtgaaaattcaagaagg
aaatgcaatgtttcaacaaaaacaagttatcagcctacatcaaaatcacctgataatttg
atagcggttgtacatatacagtcggttacccgtgggtggttagctcgaaggtatttcagt
catctgctcaggtggaagaagttagatcttgacagtccaaaaaccaggcaaacttcttgc
agtgaagttccagaagacaagggtttggcaccagaaaatctccaacatttgccgtcaaag
attgaagacctgcataagctagttttaagtacaaaattgtccatgagccagaaagagcaa
gaaaatacagcattgagggagcaagtccgacaatttgaagcacagtggtcagaacatgaa
atcaaaatgaagtcagtggaggaaacatggcaaagacagatggcttctttacaacagaag
agtctggctgcagcgaagaagagtcttggtacagaagaatcaggggaggacatatcagca
acccaaaatcctgctggcaacaatggtggtgtttatgacacggtagaccatttatccaag
gactttgagcaaacgagacagaattttgacaatgatgcaaaagcccttgctgagccaaag
tcagtaatgccttattccaagcaaatagaggaatttagaaaagtaaaagagagatttgag
atgtggaagaaagaatacaaaaatcgattacgggagacaagggcaaaactggttaagggc
ttaaatagggaaggaggaaagcaatcatggtgggggaggttaagcaagagatacactccc
acatga
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