Erigeron canadensis (horseweed): 122599851
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Entry
122599851 CDS
T07610
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00061
Fatty acid biosynthesis
ecad00071
Fatty acid degradation
ecad01100
Metabolic pathways
ecad01212
Fatty acid metabolism
ecad04146
Peroxisome
Module
ecad_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122599851
00071 Fatty acid degradation
122599851
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122599851
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ecad01004
]
122599851
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122599851
Enzymes [BR:
ecad01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122599851
Lipid biosynthesis proteins [BR:
ecad01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122599851
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of breast milk
122599851
Exosomal proteins of breast cancer cells
122599851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Trypsin_2
Motif
Other DBs
NCBI-GeneID:
122599851
NCBI-ProteinID:
XP_043628375
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All DBs
Position
5:complement(45482122..45497522)
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AA seq
682 aa
AA seq
DB search
MGITKKYVVEIEKAKEANGTRPSVGPVYRNVLAKHGFRPITNGLNSCWDVFRSSVEKHPN
NPMLGEREMIIHHHHHHANKEQVEAEAAAAGKYVWLTYKQVYDTVLNLADSMLTRGGVTK
GARCGIYGINCTKWVLTMQACNALALHCVPLYDTLGAGAVKYIICHAEVSIVFAQETKIS
EVLKTFPDTGKYLKTLVSFGTITNEQKLVAEKCGLEVFSWEEFLHLETNKERDIVNNDQL
PLKMRSDICTIMYTSGTTGEPKGVVITNESILSILSGVHHHLESMSEEFRVSDVFFSYLP
LAHIFDRVIEELFISTGASIGFWRGDIKLLIDDLKELKPTVFCAVPRVLDRIYSGLVEKI
SSSGFLKQSLFNIAYTYKLHNMGKGYKHEEAAPTFDKIIFSKVKEGLGGNMRLILSGAAP
LSTSVETFLRVVTCAHVLQGYGLTETCAGSFVAQPNEISMTGTVGPPLPNVDVCLISVPE
MGYDALAGAPRGEILLRGNSLFSGYYKREDLTKEAFVDGWFHTGDIGEWQPDGSMKIIDR
KKNIFKLSQGEYVSVENLEAIFSLVSCIDTIWIYGNSFESFLVAVVNPNKESLECWATEN
GVPGDFCSICENPKTNAYILQQLTNIAKEKKLKGFEFIKAVHVDPIPFDMDRDLLTPTFK
KKRAQLLKYYQKVVDGMYKSRR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgggtataaccaaaaaatatgtggtcgagatcgaaaaggcaaaagaagcaaacgggact
aggccatctgttggtccagtttaccgcaatgtgctagcaaaacatggattccgaccaatt
actaatggcctcaatagttgctgggatgttttccgttcatcagtggagaaacatcctaat
aatcccatgcttggtgaaagagagatgattattcatcatcatcatcatcatgccaacaag
gagcaggttgaggccgaggcagcagcagctggtaaatatgtgtggttaacttacaagcaa
gtttatgataccgtcttgaaccttgcagattctatgctcacccgtggaggagttaccaaa
ggtgcacgatgtggaatatatgggattaattgcactaaatgggttctaaccatgcaggcc
tgcaatgctcttgcccttcattgtgtccctttgtatgacactctaggtgctggtgcagtg
aaatacataatatgtcatgccgaagtctctattgtatttgcacaagaaaccaaaatttcc
gaggtactaaaaacgtttcctgataccggcaagtacttgaaaactcttgtgagctttggc
acaattacaaatgagcagaagcttgtggctgaaaaatgtggtttggaagtcttctcttgg
gaagaattcttgcatctggaaaccaataaggagcgagacatagttaacaatgaccagctg
ccattgaagatgagaagtgacatctgcacaatcatgtacactagtggaaccactggcgaa
ccaaagggagtagtaataaccaatgaaagcattctttccattttgtctggcgtacatcac
caccttgagagcatgagtgaagagttccgtgtgagcgatgtatttttttcatatctacct
ttagcccacatttttgatcgggtgattgaggaattattcatttccaccggtgcctcaata
ggattttggcgtggggacatcaagttattgattgatgatctcaaagagctaaagccaact
gtcttctgtgccgttccccgtgtgctggacagaatctattcaggtttggtagagaagatc
tcttcaagcggttttctcaagcaaagtttgtttaacattgcgtacacatacaaactgcat
aacatgggtaaaggttacaaacatgaagaggcagcgccaacttttgacaagattattttt
agtaaggtgaaagaaggtctaggagggaacatgcgacttattctatctggagcagcacct
ctttctacttctgtggaaacgtttttaagagtagtaacatgtgctcacgttcttcaagga
tatggtttaactgaaacctgtgcggggtcatttgttgctcaaccaaatgaaatatcaatg
actggtacggtgggacctccattgccaaatgtggatgtatgtttaatttcggtccctgaa
atgggatacgatgccctggccggtgctccaagaggagagatattgctacgtggaaattcc
ttgttttcaggatactataagcgtgaagatctcaccaaagaggcgtttgtagatggatgg
ttccacacaggggatattggtgagtggcaaccagatggaagcatgaaaatcattgaccga
aagaagaatatttttaagctttcccagggagagtatgtctctgttgagaatttggaagcc
atattctcccttgtttcttgtattgatacgatatggatatatggcaacagctttgagtcc
ttccttgtagcagttgttaaccccaacaaagaatcacttgaatgttgggcaacagaaaac
ggagtgcctggtgatttttgtagcatctgcgagaatcccaagacaaatgcatatattctt
caacagctaactaatattgctaaagagaagaagttaaaagggtttgaattcattaaagct
gttcatgttgaccccataccctttgacatggatcgtgatctgctcactccaacattcaag
aagaagagagcccagctccttaaatattaccagaaagtggtggatggtatgtataaaagc
aggagatag
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