Erigeron canadensis (horseweed): 122599874
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Entry
122599874 CDS
T07610
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122599874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122599874
03036 Chromosome and associated proteins [BR:
ecad03036
]
122599874
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122599874
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122599874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
NBCH_WD40
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_SCAP
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
122599874
NCBI-ProteinID:
XP_043628410
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Position
5:complement(23800692..23806786)
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AA seq
350 aa
AA seq
DB search
MSTFGMNSASSNTNPNKSAEVVSPPSDSVSSLCFSSKANYLVATSWDSQVRCWEVTKNGT
SVSTVAKISMAHDQPVLCSAWKDDGSTVFSGGCDKQVKMWPLLSGGQPTTVAMHDAPVTQ
VAWIPEMSLLVSGSWDKTLRYWDLRQSNPVHTQQLPDRCYSLTVRHPLMVVATADRNLIA
FNLQNPQTEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDEQQQSKNFTFKC
HREGTEIYSVNSLNFHPVHQTFATAGSDGAFNFWDKDSKQRLKAMSRCNQAIPCSSFNND
GSIYAYAVCYDWSKGAENHNPSTAKTSIYLHLPQEGEVKGKPRSGTVGRK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatttggcatgaattcagcttcttccaatacaaaccccaacaaatctgctgag
gttgtatcacctccaagtgatagtgtatcaagtctttgttttagttcaaaagcaaattac
cttgttgccacttcttgggatagtcaggtgagatgttgggaggtaaccaaaaacgggact
tcagttagcactgtggcaaagatatcgatggctcatgatcaaccggttttatgctcagca
tggaaggatgatggatcaacagtcttttctggaggttgtgacaagcaagtaaagatgtgg
cctttactgtctggtggtcaaccgacaactgtggcaatgcatgatgccccagtgactcag
gttgcttggattccagagatgagccttttagtttcaggaagctgggataagactctaagg
tactgggacttgaggcaatctaatcctgttcacactcaacaacttccagaccgctgttat
tctcttacagtgagacatcccctgatggtcgttgccaccgctgatagaaatcttatagct
ttcaacttgcaaaatcctcagacagaatataagagaatcgtttctcctttgaaataccaa
acaaggtgtgttgctgcatttcccgatcaacaaggtttcttggttgggtcgattgaagga
agggttggtgtgcaccatcttgacgaacaacaacaaagtaagaatttcacatttaaatgc
cacagagagggaaccgagatctactctgtcaattctcttaactttcatccagttcatcag
acatttgcaaccgccggatcagatggtgcatttaatttttgggacaaagatagcaaacaa
agactaaaggcaatgtcacggtgcaatcaagctataccttgcagtagctttaacaacgat
ggctccatatatgcttatgcggtatgttatgattggagcaagggtgccgaaaatcataac
ccatcgacagcaaagacgtccatttacttgcacttgccccaggagggtgaggttaaaggc
aagccacgttccgggactgttggaaggaaatga
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