KEGG   Erigeron canadensis (horseweed): 122599874
Entry
122599874         CDS       T07610                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122599874
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecad03019]
    122599874
   03036 Chromosome and associated proteins [BR:ecad03036]
    122599874
Messenger RNA biogenesis [BR:ecad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122599874
Chromosome and associated proteins [BR:ecad03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    122599874
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_SCAP Beta-prop_BBS7
Other DBs
NCBI-GeneID: 122599874
NCBI-ProteinID: XP_043628410
LinkDB
Position
5:complement(23800692..23806786)
AA seq 350 aa
MSTFGMNSASSNTNPNKSAEVVSPPSDSVSSLCFSSKANYLVATSWDSQVRCWEVTKNGT
SVSTVAKISMAHDQPVLCSAWKDDGSTVFSGGCDKQVKMWPLLSGGQPTTVAMHDAPVTQ
VAWIPEMSLLVSGSWDKTLRYWDLRQSNPVHTQQLPDRCYSLTVRHPLMVVATADRNLIA
FNLQNPQTEYKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDEQQQSKNFTFKC
HREGTEIYSVNSLNFHPVHQTFATAGSDGAFNFWDKDSKQRLKAMSRCNQAIPCSSFNND
GSIYAYAVCYDWSKGAENHNPSTAKTSIYLHLPQEGEVKGKPRSGTVGRK
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgtcaacatttggcatgaattcagcttcttccaatacaaaccccaacaaatctgctgag
gttgtatcacctccaagtgatagtgtatcaagtctttgttttagttcaaaagcaaattac
cttgttgccacttcttgggatagtcaggtgagatgttgggaggtaaccaaaaacgggact
tcagttagcactgtggcaaagatatcgatggctcatgatcaaccggttttatgctcagca
tggaaggatgatggatcaacagtcttttctggaggttgtgacaagcaagtaaagatgtgg
cctttactgtctggtggtcaaccgacaactgtggcaatgcatgatgccccagtgactcag
gttgcttggattccagagatgagccttttagtttcaggaagctgggataagactctaagg
tactgggacttgaggcaatctaatcctgttcacactcaacaacttccagaccgctgttat
tctcttacagtgagacatcccctgatggtcgttgccaccgctgatagaaatcttatagct
ttcaacttgcaaaatcctcagacagaatataagagaatcgtttctcctttgaaataccaa
acaaggtgtgttgctgcatttcccgatcaacaaggtttcttggttgggtcgattgaagga
agggttggtgtgcaccatcttgacgaacaacaacaaagtaagaatttcacatttaaatgc
cacagagagggaaccgagatctactctgtcaattctcttaactttcatccagttcatcag
acatttgcaaccgccggatcagatggtgcatttaatttttgggacaaagatagcaaacaa
agactaaaggcaatgtcacggtgcaatcaagctataccttgcagtagctttaacaacgat
ggctccatatatgcttatgcggtatgttatgattggagcaagggtgccgaaaatcataac
ccatcgacagcaaagacgtccatttacttgcacttgccccaggagggtgaggttaaaggc
aagccacgttccgggactgttggaaggaaatga

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