KEGG   Erigeron canadensis (horseweed): 122599880
Entry
122599880         CDS       T07610                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 1-like
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122599880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122599880
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecad04147]
    122599880
Membrane trafficking [BR:ecad04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    122599880
Exosome [BR:ecad04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122599880
  Exosomal proteins of other body fluids (saliva and urine)
   122599880
  Exosomal proteins of colorectal cancer cells
   122599880
  Exosomal proteins of bladder cancer cells
   122599880
SSDB
Motif
Pfam: VPS28 GDH_C
Other DBs
NCBI-GeneID: 122599880
NCBI-ProteinID: XP_043628417
LinkDB
Position
5:25922877..25925374
AA seq 209 aa
MEVKLWNDKREREMYDNFGELYAIIKATEKLEKAYVRDIISSSDYEIECQKLIAHFKTLS
STLRDTVPNIERFHDTYKMDCPSAMNRLITSGVPATVEHRAAAAASGVTSAATVAECVQN
FITAMDSLKLNMTAVDQVFPLLSDLSGSLNKLSILPPDFEGKTKMKEWIGRLAKMGASDE
LTEQQARQLHFDLESSYNSFMAALPTGGT
NT seq 630 nt   +upstreamnt  +downstreamnt
atggaagtgaagttatggaatgacaaacgtgagagggagatgtacgacaactttggcgag
ctttatgcgatcatcaaggctacagaaaagctagaaaaggcttatgttagagatattatc
tcatcttccgattacgagattgagtgtcagaaactgatcgctcattttaaaacgctctcg
tccacgctcagagatactgtaccaaatatcgagaggtttcatgatacttacaagatggac
tgcccttctgcgatgaaccgccttataacttctggtgtgcctgctacagtggagcatagg
gctgctgctgccgcttctggggtgacctctgctgcgactgtcgcagagtgtgtgcagaac
tttataactgcaatggattccctcaagctaaatatgactgcggttgatcaagttttcccg
cttctgtctgatttgtcggggtcgttaaacaagctgtctattttacccccagattttgaa
gggaagactaagatgaaagagtggatcggtaggctagcaaagatgggagcttcagatgag
ttgactgagcagcaggctaggcagcttcatttcgatctggagtcatcatacaattccttc
atggctgcattgcctactggtgggacgtga

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