KEGG   Erigeron canadensis (horseweed): 122599957
Entry
122599957         CDS       T07610                                 
Name
(RefSeq) THO complex subunit 7A-like
  KO
K13176  THO complex subunit 7
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122599957
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecad03019]
    122599957
   03041 Spliceosome [BR:ecad03041]
    122599957
Messenger RNA biogenesis [BR:ecad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     122599957
Spliceosome [BR:ecad03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    122599957
SSDB
Motif
Pfam: THOC7 SH3BP4_C bZIP_1 APG6_N ATG14 MG280
Other DBs
NCBI-GeneID: 122599957
NCBI-ProteinID: XP_043628514
LinkDB
Position
5:28475707..28478231
AA seq 238 aa
MKARKVSGRGETMGHFAFGPLEDDLIIKHRLLTRTTTTRGEPPLRKLQKKFTAFAVEAEK
DADNYADCERLAKVFLQELKTFELPLVKTKAVIDANVREKENFNELNDEINRKIVEAQDD
IEDLKKQLEASKVERKHKEECETIRKLIAAQTPRSDTQKLINQLEMEIAALEAENTASSS
TLELRKKQFALLLHVVDELQNTIEEDQKSMMEEMRMTLYENKNIVEDAAGSSEAMVIN
NT seq 717 nt   +upstreamnt  +downstreamnt
atgaaagctaggaaagttagcggcagaggagaaacaatgggacattttgcatttggaccc
ttagaggatgacttaatcattaaacatcggcttctcactcgaacaacaactacacgaggt
gaacctccgttgagaaaacttcaaaagaagtttacagcttttgctgttgaagccgaaaag
gatgcagacaattacgctgattgtgagaggcttgcgaaggtgtttttacaggaattgaaa
acttttgagcttccgttggtgaagacaaaggcggttattgatgcaaatgttagagaaaag
gagaattttaatgagttgaatgacgagattaataggaagatagtggaagcacaagatgat
attgaagatttgaaaaagcaacttgaggcgagtaaggttgagaggaagcataaggaggaa
tgtgagacgattaggaagttgattgctgctcaaacgccaagatctgatacacagaagctg
attaatcaattggagatggagatcgctgctttggaagccgagaatactgcaagttccagc
acacttgagcttcgtaaaaagcaatttgctcttctgttgcatgtggttgatgagctacaa
aacaccattgaggaagatcaaaagagtatgatggaagaaatgcgaatgacgctttatgag
aacaaaaacatcgttgaagatgctgccgggagttccgaagctatggtcattaattaa

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