Erigeron canadensis (horseweed): 122599968
Help
Entry
122599968 CDS
T07610
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122599968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122599968
03036 Chromosome and associated proteins [BR:
ecad03036
]
122599968
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122599968
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122599968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
122599968
NCBI-ProteinID:
XP_043628529
LinkDB
All DBs
Position
1:complement(23770608..23779326)
Genome browser
AA seq
1001 aa
AA seq
DB search
MFGASNPFGQSSNSPFGSPSVFGQNNNANNNPFAQKPFGSPSPFGAQTGGSIFGGTSTGV
FGSSPAFGASSTPTFGSSMPAFGASSSPAFSSSSPAFGASSSPAFGGTSAFGQKPAFGFG
STPQASPFGSSFQQSQPAFGTSVFGSSPFGASSQPAFGAPSTPAFGSASTSAFGATSTPA
FGVTSTPAFGSTSTPSFGNTGSGFGVSGSSVFGSSTPAFGASSTPAFGVSSSAFGSSSTA
FGTSSTPAFGSSPTPAFGSASSPFAFGSSPAFGQSAAAFSSSPFGTATSTFGAPSSPFGV
QTTTPAFGSPGFGQPSVQRVGSRVTPYAQTPEADSGASGTAVGKLESISAMPAYKEKSHE
ELRWEDYQAGDKGGPNPASQSSSGMGFGNNTQQSNLFSSSPAFNQTSSNPFSSTTSTNPF
APKTSTFSTPGFSNSTPSLVSSPFSVATSNPFASTPTSTPSVFGTASAFASATSPSLFGT
PSTSTFGTPSIFNTNQPQGTQFSTSLNFANTQSTPLFQSTPSQTSSPFAQSNFAQPVSAF
SAPAFNQSNAFATNMFSSTPSLNASSMAFNSTTPSLSMPFQSAQPTQNPGGFAFPAPTAG
IGGTSSIFGQNNFGQLSSNQVPALAQQQSITNPFGTLPAMPQMSIGGVGNAPSIQYGISS
LPVVDKPAPLRLSSVLTSRHLSQRRVRLPARKYLPKTDGPKVSFFSDEEDTTSTPKADAL
FVPRENPRALVIRPLEQGPGKPSADKPKNASSPAQANGESREFASTTHVNGRFADNGNRN
HSENGILKEQTTSINMVQKTNGVHDDQSAPKSDSYISLTGHRAGEAAIVYEHGADIEALM
PKLRQSDYYTEPRIQELAAKERAQPGFCRRVKDFVVGRHNYGSIKFLGETDVRRLELESL
IQFNNREVIVYLDETKKPPIGQGLNKPAEVTLLNIKCSDKKTGRHFTEGPRIEKYKEMLK
KKAEDQGAEFVSYDPVKGEWKFRVSHFSRYWLQDDNEDDLA
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcgctagtaacccttttgggcagtcttctaatagcccatttgggtccccttca
gtttttgggcaaaacaataatgcaaacaacaatccatttgcgcaaaaaccatttggtagc
ccatctccctttggtgcacaaactggaggttctatctttgggggcacatctactggtgtg
tttggttcctcaccagcttttggtgcatcatcaactcctacttttgggagttcaatgcct
gcttttggagcttcatcaagcccagccttcagctcatcaagcccagcctttggtgcttca
tcaagtccagcctttggtggtacttctgcgtttgggcaaaagcctgcatttggctttgga
tccactccacaggcgagtccttttggaagttcgtttcagcaatcacaacctgcttttgga
accagcgtgtttggctcatcaccttttggagcttctagtcaacctgcctttggtgctccg
agcacaccagcatttggatccgcaagcacttctgcttttggtgccacaagcactcctgcg
tttggtgtcacaagcacacctgcttttggttcaacatcaaccccatcatttggcaacaca
ggatccggatttggtgtttctggctcttctgtttttggatctagtactccagcatttggt
gcttctagcactccagcctttggtgtatcaagttcagcatttggttcttcgagtactgct
tttggaacctcaagtactccagcatttggctcttcaccgacccctgcttttggctctgct
agctctcctttcgcttttgggtctagtccagcatttggtcaatctgcagctgcatttagc
agcagtccatttggtactgctacctcgacctttggggcgccaagctctccgtttggtgtt
cagactacgacaccagcatttgggagccctggttttggacaaccgtctgttcaacgtgtg
ggaagtagagtaaccccttatgctcagacacctgaggctgatagtggtgctagcggtacc
gctgtcgggaaactggaatcaatatcggcgatgcctgcatacaaagaaaaaagtcatgaa
gaactcagatgggaagactatcaagcaggagataaaggtgggccaaatcctgctagtcag
tcttctagtggaatgggctttggtaataatactcagcaatcaaaccttttttcttcctct
cctgcgtttaatcagacatcttcaaatccattttcttccactacatctaccaacccattt
gccccaaagacctcaactttcagtactccgggtttttcaaactcaaccccttcacttgta
tcttcgccctttagtgttgccacatctaacccatttgcatcaacaccaacttcaacacca
tctgtatttggtacagcttctgcttttgcatctgctacttctccatctctttttggtact
cctagtacatcaacttttggaacaccatctatatttaatacaaatcaaccccagggaact
caattttctactagtctaaacttcgccaacacacaatctactcccctgtttcagtccact
ccctcccaaaccagttctccgtttgcgcagagtaactttgcgcagcctgtctcagcgttt
agtgctcctgcctttaatcaatcaaatgcatttgcaacaaacatgttctcaagcacccca
tcattaaacgctagcagcatggcattcaactcgacaactccttcactttcaatgcctttt
caatcagctcaaccaactcagaatccaggtggttttgctttcccagcaccaacagccggc
attggtggcacatctagcatttttggtcagaataattttgggcaactgtcttctaatcag
gtcccagcacttgcacaacagcaatctattacaaatccttttggaactctaccagcaatg
cctcaaatgtcaattggcggtgtgggaaatgcaccttcaattcaatatgggatttccagc
ttgccagtggttgacaaacctgctcccctgaggctatcatctgtgctgacttctcgccat
ctttctcaacggcgagttaggttgcccgctaggaaatatctcccgaaaactgatggtcca
aaggtctcatttttcagtgacgaggaagatactaccagcacacccaaagcagatgctctt
ttcgttcccagggagaatccaagagctctggtcattcgtcctctagaacaagggcctgga
aaaccatcagcagataaaccaaaaaatgcttcttctccagcacaagctaatggtgaaagt
agagagttcgcttctaccactcatgtaaatgggcgctttgcagataatggaaatagaaat
cattctgaaaatggcattctaaaggaacaaactacatctattaatatggtgcaaaagact
aatggtgtacatgatgatcagtcagccccgaaatcagactcatatatcagcttgacgggt
cacagagccggagaggcagcaattgtatatgaacacggggctgatattgaggcacttatg
cccaaactacgtcaatcagattactacactgagcctcggatccaggagttagcagccaaa
gagcgagcccaaccaggtttttgccgccgtgtaaaggattttgttgtgggtcgtcataat
tatggaagcatcaaattccttggggaaacagacgtgagacgtttagaacttgagtctctt
atccaattcaataatcgcgaagtgattgtttatttggacgagacaaagaaaccacctatc
ggacaaggcctcaacaagcctgctgaagtaacacttctgaacataaagtgttctgacaaa
aaaaccgggcgccatttcactgaaggacctagaattgaaaaatataaagaaatgctcaaa
aagaaagccgaggaccaaggtgccgagtttgtctcatatgatcctgttaaaggggaatgg
aagttcagggttagccatttcagtcggtactggctccaagatgacaatgaagatgacttg
gcctga
DBGET
integrated database retrieval system
