Erigeron canadensis (horseweed): 122600044
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Entry
122600044 CDS
T07610
Name
(RefSeq) far upstream element-binding protein 2-like
KO
K13210
far upstream element-binding protein
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122600044
03041 Spliceosome [BR:
ecad03041
]
122600044
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122600044
Spliceosome [BR:
ecad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122600044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
122600044
NCBI-ProteinID:
XP_043628627
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All DBs
Position
5:complement(34328125..34333854)
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AA seq
596 aa
AA seq
DB search
MADEPHYHSGGDSAPVKRKYDDSVPRRATGFSDGPPSSNSAPSYNNVPPPMDEIQIAKQR
AQEIAARIYSSAEAKRPKFENGGSGWDSNDNSGFSSAPNDFGSTAPSVPSSYGYGNPSKK
IEIPQGRVGVIIGKAGETIKYLQQQSGAKIQVTRDMDADPHSLTREVELTGSEESIEKAE
RLIKDVLAEAESGGSGTVSRRVSGQSGGAEQFVMQIPSRKVGLVIGKGGETIKNFQASTG
ARIQVIPLHPPPGDTSTERTVQIDGTSDQIEAAKQLVNEVISENRQRNSMGSGYSQQGYQ
ARPPGQQMQQQDYYGYAQPGAYPGQQAQYTQQPYASYPQQAAGGYATSWDQSSGQQTAQG
GGGYDYYGQQQSQQTQPPSASTPANATSYGYGQQGQGYGQEGYGGYASAPQSGYGQQHGY
SNPTPGYNSAGQTTDGQNAAYGGQGDNASQAPPTSAPQSGYSQPPGPNSNYPPQGASQPG
YGAPPTSQPEYGTPGYGGYGPPPTQKPPAYGQQPQQSPNAASVQTGYSQPGYGAPPAYGT
AGYAQPPYGAPPVTQPGYGSYGGGYQPPAYSADPAVTAAPPTQVAQSAPKASPQQN
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaaccacactaccactccggcggcgattccgcccccgtgaaacgcaaatac
gatgactcagttcctcgtcgcgccaccggattctccgacggacctccgtcttccaactca
gctccgtcgtacaacaacgttcctccaccaatggacgagatccagatcgctaaacagaga
gctcaagaaatcgccgctcgtatctatagcagcgctgaagctaaaagacctaaatttgaa
aacggcggctctggttgggattctaatgataattctggttttagctctgctcctaatgat
tttggatctactgctccttcagtgccttcctcttatggttatggaaatccaagcaaaaag
attgagataccacaaggcagggttggtgttattattggtaaagctggtgaaactattaag
tatcttcagcagcaatctggagcaaagatccaggttaccagggacatggatgcagacccg
cattcacttactagagaagttgagctaacaggctctgaagaatctattgaaaaagctgag
aggttgattaaagatgttcttgccgaggctgagtcgggtggttctgggacagtttctcga
agggtgagtggtcagtcaggtggggccgaacagtttgtgatgcaaatcccgagcaggaag
gttggtcttgttattggcaaggggggtgagactataaaaaattttcaagccagtactgga
gctcgtattcaggttataccactacatcctccccctggtgatacatctacagagaggacc
gtacagatagatggaacaagtgatcagatcgaggctgcaaaacagttggttaatgaagta
ataagtgagaatcgtcaaagaaattcaatgggtagtggttactctcagcaaggttatcaa
gctcgaccccctggtcaacagatgcagcaacaagattattatggctatgcacaacctggt
gcataccctggtcaacaggctcagtacacccagcagccgtatgctagttacccacaacaa
gcagcaggtggatatgcaaccagctgggaccaatcgtctggtcaacaaacagcccaggga
ggtggtggttatgattactatggtcagcaacaaagtcaacagacccaaccaccaagtgca
tcgacccctgcaaatgcaacgtcttatggttacggtcaacaaggtcaaggttatggacaa
gaaggttatggagggtatgcatctgcacctcaatcaggttatggtcaacagcatggttac
agtaatcctacaccgggatataattctgccggtcaaaccactgatggccaaaatgctgcg
tatgggggtcaaggcgacaatgcaagtcaagctcctccaacatctgctcctcaatctggt
tacagtcagccgccaggtcctaactctaattatccacctcagggtgctagtcaacccgga
tatggggcccctcccacttcccagccagagtatggaactcctggatatggtggttatgga
cctcctccaacacaaaagcctcctgcttacgggcagcaaccccagcagtcgccaaatgct
gcttccgtacaaactggatattctcaacccggatatggagcaccacctgcttatggtact
gcaggatacgcccaaccaccatatggtgcaccacctgtgactcaaccaggttatggatca
tatggaggtggttatcaacctcctgcttactctgctgatcctgctgtaactgcagctcca
ccaactcaggtggctcaatctgctcctaaagcctctcctcagcaaaattga
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