Erigeron canadensis (horseweed): 122600073
Help
Entry
122600073 CDS
T07610
Name
(RefSeq) AP-5 complex subunit zeta-1
KO
K19025
AP-5 complex subunit zeta-1
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122600073
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
122600073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
Motif
Other DBs
NCBI-GeneID:
122600073
NCBI-ProteinID:
XP_043628664
LinkDB
All DBs
Position
5:complement(31918962..31924596)
Genome browser
AA seq
575 aa
AA seq
DB search
MTSSMEGGGGDWEIHLRTLSSSARESNFSTDPASDASLLHSVKKLIELCKTENSQNLIAR
VYPQLNKIFQRSVSSQSKSSSSSGLLLLAILQYFIDNGEFVLHDADPSLRSFFRSCLSRE
FADPVVAEATLDFLNLNKRKILLAYPTLLPQFYPLMLKLIAWNGEKLAKSFFKVFPGLMA
PGSFLPLFISLVDLPVLVVALEKVERSTGPLIGSSIASIQKSAAPEMLLALMDEAYTGST
IGDGGADSESEDSSSITSDPLFLECLKDENDGLAQRHWTSPGMEAALQTALSAPSDRLKQ
ALKMAPPLLDAYFSIALRDVNQSLKCALIPMLLERYSKLFPDKVFSYEVRKRLLDFTLAA
FHQSPEFVAILKKPIVDRLGEAYESPEKTELALQLCWAIGEHGGGGASHKDAARELFESL
ELLLYENLSSSRLGVGDSVLGSSNSTVRRSSQSRLLCFVVTAIAKIATHHPELLPRARVS
LGKVAHSRISDARVWKRARDYLGLMNEPAICLSVLGPSGPSSGLVQKPGTINWSEGKTKM
IANIPFYILGGQEGPPHHDFSLMDILPGKSAGSVL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgtcaatggaaggaggaggaggagattgggaaatacatctgcgaacattatca
tccagcgcccgagaatccaatttctccactgaccccgcgtccgacgcttctcttcttcat
tccgtaaagaagctaatagagctctgtaaaactgagaattctcagaatttgatagccagg
gtttatcctcagctcaataagatctttcagcgctccgtttcttctcaatcgaaatcttcc
tcttcttccggccttttattattggctattcttcaatactttattgataatggagagttt
gttctacatgatgccgatcctagtttacgcagtttttttcgctcctgcttgagccgtgag
tttgcagaccctgttgttgcagaagcaactctagattttttgaacctgaacaagaggaaa
attttacttgcatatcctactttactccctcagttttatccattgatgcttaagctgata
gcatggaatggcgagaaattagctaaatcattctttaaagtattccctggcttgatggct
cccgggtcgtttcttcctctgtttatatcacttgttgacttaccagtgttggttgtggca
ttggaaaaggtggaaaggagtacgggaccattgattggtagcagtatagcatcaatccag
aagagtgcagctccagagatgctgttggctctcatggatgaagcttatactggttcaact
ataggagatggaggtgcagactctgaatctgaggacagcagttcaatcacttccgatcca
ctatttcttgaatgtcttaaagatgaaaatgatggccttgctcaacgccattggacttct
cctggtatggaagcagcactgcagacagcactatctgctccgtccgatagattaaaacaa
gcactcaaaatggcacctccgcttcttgatgcatatttttccatagcattacgtgatgtg
aatcagtctctgaaatgcgcattaatccccatgcttcttgaaagatattctaagctattt
cctgacaaagttttctcctatgaagtacgaaagaggcttttagatttcacattggctgca
tttcatcaatccccagagttcgttgccattttaaagaaacccatagtagatagacttgga
gaagcttatgagagtccagaaaagactgagttggcattacaattatgctgggccattggg
gaacatggagggggtggtgcttctcacaaagacgcagctcgtgaactttttgagagtcta
gaactacttttgtatgaaaatctttcatcaagccgtctaggtgttggtgattcagttctt
ggctccagtaactcaaccgttagaagatcatcacaatcaaggcttctctgttttgttgtg
acagcaatagcaaagattgcgacacaccatcccgagttactgcctagagctcgtgtgtca
ctgggcaaggtggcacattcacgtatctctgatgcaagagtctggaaacgagctcgtgat
tatttgggcttaatgaatgaacctgcaatttgtttgtctgttcttggcccatcaggccca
tcaagtgggttggtacagaagccagggacaatcaattggagtgagggcaaaacaaagatg
atcgctaacattccattttacattctaggtggccaggaaggcccccctcatcatgatttc
tctttgatggacatccttcctggaaagtcggctgggtctgtactttag
DBGET
integrated database retrieval system
