KEGG   Erigeron canadensis (horseweed): 122600218
Entry
122600218         CDS       T07610                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122600218
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ecad03041]
    122600218
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122600218
Spliceosome [BR:ecad03041]
 Complex B
  Other components
   Prp19 complex
    122600218
 Complex C
   Prp19-CDC5 complex
    122600218
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    122600218
SSDB
Motif
Pfam: BCAS2 THOC7 Spectrin Plk4_PB2 YjbH
Other DBs
NCBI-GeneID: 122600218
NCBI-ProteinID: XP_043628833
LinkDB
Position
5:complement(42550865..42556883)
AA seq 249 aa
MANDNGNAPLLLEAPPSSRPSWSSSAAQIDALPYIDDEYGDPKVKAEVDRLIEEEMRRSS
KRPSDYLKDLPPVAKFNFENYPMLGREYERVRAGKPMVPLDMSRYGLDVPSANKRNDETA
WKQALQKSQRLLQHQVIRLENLDLMSKYGADVWKQHNQRLEAFLSRMQAQAAELNEKIEI
VNRERKYHQQNTAYELNALSAQWKELCQKNIAIEAACVQIESYLEQLKAEAVESGWNLDI
NMENGSSLP
NT seq 750 nt   +upstreamnt  +downstreamnt
atggcaaacgacaacgggaacgcgccactgctattagaagcgccaccatcttcccggcca
tcatggtccagcagcgccgcccaaatcgacgcattgccttacatcgatgacgaatacggc
gaccctaaagtcaaagctgaagttgaccgtttaattgaagaagaaatgcgtcgcagttcc
aaacgtccttctgattatcttaaagaccttcctcctgttgccaaattcaactttgagaat
tatccaatgcttggtagggagtatgaaagggtgagagctgggaaacctatggtgccttta
gatatgtcaagatacgggctcgatgttccatctgcgaataaacggaatgacgaaactgct
tggaagcaggcacttcagaaatctcaacgtttattgcagcatcaagttatcaggctggaa
aatttggatctgatgtcgaaatatggggctgatgtatggaaacaacacaatcaaagacta
gaagcattcttatcaagaatgcaagcacaagcagccgagttaaatgaaaagatagaaatt
gttaaccgggaacgtaaatatcatcagcaaaacacagcatacgagttaaatgctttatct
gcacaatggaaggaactttgccagaagaacatagcaattgaagctgcatgtgtccagatt
gaaagctatcttgaacaattaaaagcagaagctgttgagagtggctggaatctcgatatt
aatatggagaatggttcttcgttgccttga

DBGET integrated database retrieval system