Erigeron canadensis (horseweed): 122600240
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Entry
122600240 CDS
T07610
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03015
mRNA surveillance pathway
ecad04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122600240
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122600240
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecad01009
]
122600240
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122600240
03036 Chromosome and associated proteins [BR:
ecad03036
]
122600240
Protein phosphatases and associated proteins [BR:
ecad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122600240
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122600240
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122600240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Htt_N-HEAT_1
Vac14_Fab1_bd
PDS5
HEAT_EF3_N
HEAT_EZ
Adaptin_N
SCD
TAF6_C
Cnd1
CLASP_N
INTS7_N
TPR_TNPO3_IPO13_3rd
IFRD
Motif
Other DBs
NCBI-GeneID:
122600240
NCBI-ProteinID:
XP_043628865
LinkDB
All DBs
Position
1:complement(39577215..39585557)
Genome browser
AA seq
587 aa
AA seq
DB search
MSMGDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDSFVPMVKRLAAGEWFTARVSACGLFHIAYPSASEALKTELRSVFSQLCQDDMPMVR
RAAATNLGKFAATVEYAYLKTDIMQIFEDLTQDDQDSVRLLAVEGCASLGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTKTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFSRILSPELAMQHILPCVKELSSDSSQHVRSALASVVMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPDWAMQHIIPQV
LDMINNPHYLYRMTVLRAISLLAPVMGSEITCSKLLPVVINISKDRVPNIKFNVAKVLQS
LIPIVEQSVVEKSIRPCLVELAEDPDVDVRFFANQALQSIDQVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgggtgacgagcctttgtacccgatagcggtattgatagacgagctcaaaaac
gatgatatacagctgcgtttaaattctattagaaggttgtctacgattgctcgtgctcta
ggagaggagcggacaagaaaggagttgattcctttcttgagtgaaaacaatgatgacgat
gacgaggttcttcttgccatggcggaggagttaggtgtttttattccgtatgttggtgga
gtagagcatgctcatgtgttgttgcctccgcttgaaacgttatgtactgttgaagagacg
tgtgtgagggacaaagctgtggagtcgttatgcaggatcggttcacagatgagagagtct
gatctcgttgattcgtttgtacccatggttaagaggttggcagctggtgaatggttcact
gctcgagtttctgcatgtggtctgtttcacattgcttatcctagtgcctcggaggcgttg
aagacggaactgaggtcggtatttagtcagctatgtcaagatgacatgccgatggttagg
agagcagctgcgacaaacttggggaagtttgctgctactgtagagtatgcttatctcaag
actgatatcatgcaaatctttgaagatcttacccaggatgatcaagattctgttcgtttg
ctagctgtcgagggttgtgcttccctcgggaagttgctagaaccccaggattgcgttgca
catattcttcctgtcattgttaatttttctcaggataagtcttggcgtgttcgttatatg
gttgctaatcagttgtatgagctatgtgaagctgtgggccccgagcctaccaagacggat
ttggttccagcttatgtgaggttgcttcgggataacgaagcggaagtacgtattgcagct
gcaggaaaggtcaccaagtttagtcgaattcttagcccagaacttgcaatgcaacatatt
cttccatgtgtaaaggagttgtcatcggattcttctcagcatgttaggtccgctctagca
tctgttgtaatgggcatggcccctgttctaggaaaggatgcaacaatcgaacaacttcta
cctatatttctttcactcttaaaggatgaatttccagatgtacgcctcaatattattagt
aagctagatcaagtgaatcaggttattggaattgatcttttgtctcagtcgttacttccg
gccattgttgaacttgcagaagataggcattggagggttcgcttggcaatcatagaatac
ataccactgttggctagtcagttaggtgtaggattttttgatgataaacttggtgcgctc
tgtatgcaatggttacaagacaaggtttactccatcagagatgctgctgctaataactta
aagcgccttgcagaggaatttggtcctgattgggcaatgcagcacattattccacaggtt
ctggatatgattaacaatccccattacttgtaccgtatgacagttcttcgtgctatttct
ttattggcccctgttatgggctcagaaatcacttgttctaagttgcttcctgtagtcatt
aacatatccaaggacagagtaccaaatatcaagtttaatgttgcaaaggtgctgcaatcc
ctaattcctatagttgaacagtcggtggtagagaaaagcattcggccatgcctggttgag
ctggcagaggacccagatgttgatgtccgtttttttgccaaccaagctctccagtcaatt
gatcaagtcatgatgtctagctaa
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integrated database retrieval system
