Erigeron canadensis (horseweed): 122600284
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Entry
122600284 CDS
T07610
Name
(RefSeq) nuclear pore complex protein NUP155 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122600284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122600284
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122600284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
122600284
NCBI-ProteinID:
XP_043628925
LinkDB
All DBs
Position
1:complement(41650783..41660256)
Genome browser
AA seq
1462 aa
AA seq
DB search
MSWENDVVMRDIAKASVVVSDRIGRDVSAQLDLEESLEASRYTSHPYSTHPREWPPLVEV
VDSRELPSVLIERYNSAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGE
EQAICAVGLVKAKPGIFVEAIQYLLVLATPVELLLIGVCCSGSGDGSDPYAEVSLQPLPD
YTIPSDGVTMTCIACTNRGQIFLAGRDGHIYEMHYTTGSGWHKNCRKVCLTAGLSSVVSR
WVVPNVFKFGAVDPIVEMAVDNERHILYVRTEEMKIQVYTLGPNGDGPLKKVTEEKNLIN
QRDSHGGSRHAAAARSTKASIVSISPLSTIESKWLHLVAILSDGRRMYLSTTKSSGNSGS
FSNNIQKPSCLKVVTTRPAPPLGVGGGLSFGAISLAGRSQSEDLSLKIETAHYSSATLVL
SDSSPTTSSLLIVNRDSTTQSSSSTSLGTSVRSSRALRECVSSLPIEGRMLAVAEVLPLP
DTAATVQSLYSQLEFCGYDNFGESSEKLAGKLWARGDLPTQHILPRRRIIIFSTMGMMEV
VFNRPVDILRRLLESNTPRTILEDFFNRFGAGEAAAMCLMLAAKIAHTENFINNVVAEKA
AEAFEDPRVVGVPQLEGSGALANTRTGAGGFSMGQVVQEAEPVFSGAHEGLCLCASRLLL
PVWELPVMGSSDATSGDGIIGCRLSAEAMQVLEDKLRSLEKFLRSRKNQRRGLYASVGLG
DMTGSILIGAGTDMGTGDWGMARNLFSPYSRGLESGNAATSNKRQRLPYSPAELASMEVR
AMECVRQLLLRCAEALFLLQLLSRHHVTRLLQSFELNIKQALLQLTFHQLVCSEEGDRLA
TRLVSALMEYYTGPDGRGTVDDISGRLREGCPSFYKESDYKFYLAVECLEKAATASNNEE
RETLARDAFSKLSGVPESADLQTVCKRFEDLRFYEAVVRLPLQKAQALDPAGDALNEQAD
AGVLEHALAQRERCYDIIISALRSLKGEVSLREFRSPIRSSAQSSLSPSDKKKYICQIIQ
LGVQSSDKIFHEHLYRSLIDLGLEDELLEFGGPDLVPFLQNAGREATQEHQAAASFTTGV
SPLRYSGAPTKYFELLARYYVLKRQHVLAAHVLLRLAERRSSGLDNIPTLDQRRQYLSNA
VIQAKSAIDGDSLTNSSRDGGLLDLLEGKLTVLQFQIKIKQELEGVVSKIEATPSTSEAA
SNDSMAEYLQTIKEKVNELSLDLKTITQLYNDYAVPFELWEICLEMLYFASYSGDTDSSI
VRDTWARLMDQALSKGGIAEACSVLKRIGSHVYPGDSAVLPLDTLCLHLEKAAMDRLVSG
VEVVGDEDVARALLAACKGAVEPVLNTYDHLLSNGAILLSPSLKLRLLRSVLVVLREWAV
SVSARGMGTSPMGASLILRGTFSMDQRTAINHGIRDKITSAANRYMTEVRRLALPQGQIE
VVYRGFKELEESFLTSFSFERF
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgagttgggaaaacgacgtcgtaatgcgggatatagcgaaagcaagcgtagtagtaagt
gatagaataggcagagatgtatccgcacagctggaccttgaagaatcactcgaagcttct
agatatactagccatccttattctactcaccctagagagtggcctcctttggttgaagta
gtagatagtagggagttgccttcagtacttatagaaagatataattctgctggaggggaa
ggcactgctttatgtggaatatttcccgagattcgtagagcatgggcatctgtagataac
tccttatttctttggcgatttgataagtgggacggccaatgtccggaatatagtggcgag
gaacaagctatatgtgccgtaggtttggtcaaagccaaacctgggatttttgttgaggct
atccaatatctcctagtcttagctactcctgttgagttgcttcttattggtgtatgctgc
tctggaagtggtgatgggtcagatccttatgcagaggtttcattacagcccctacccgat
tacaccataccatctgatggagttaccatgacatgtattgcatgtacaaatagaggtcag
atatttttggctggacgtgatggacacatatatgagatgcattatacaactggttcgggt
tggcacaaaaactgtcgtaaagtatgtttgactgctggtcttagtagtgttgtttcaagg
tgggtggtaccgaatgtattcaagtttggtgctgtagaccccattgttgaaatggctgtt
gataatgagaggcatatattgtatgtccgaactgaagaaatgaaaattcaggtttacact
ttaggtccaaatggcgatggaccacttaagaaagtgacagaggagaagaatttgattaat
cagagggattcacatggcggcagcaggcatgctgcagctgctcgatcgacaaaagcttct
atagtttctatatctcctttatctacaatagagtcaaaatggctgcatcttgtagcaatc
ttatcagatggtagaagaatgtatctatcaactactaaatccagcggaaacagtggctcg
tttagtaataatattcagaaaccaagctgtctaaaagttgtcacaacccgacccgctcct
ccgttgggggtgggtggtgggttgtcatttggggcaatatctctagcaggtagatctcaa
agcgaagatctttctttaaagatagaaacagcacattactcgtctgcgacacttgttcta
tctgattcatctccaactacgtcatcacttctgattgtgaatagggattcaactacacag
tcatcatcttccactagtttagggacaagtgttaggagttcaagggctttaagagaatgt
gtatcttctttacctattgaaggccgtatgctggctgttgctgaagtcctacccttacca
gatacagctgcaactgtgcaatcactgtattcacaattagaattttgtgggtatgacaac
tttggtgagtcatctgaaaagttggctgggaaattatgggctagaggtgatttgccaact
cagcatatattacctaggcgccggattattattttcagtactatggggatgatggaagtt
gtttttaatagaccagttgacattttaagaaggttactagagtctaacactccaagaaca
atacttgaggacttttttaatcgatttggtgctggtgaggctgctgcgatgtgcctaatg
ctagctgcaaaaatagcacacacggaaaattttataaataatgttgttgctgagaaggct
gctgaggcctttgaggacccgagagttgtaggtgtaccccagcttgaaggtagtggggca
ttggctaatacccggacaggtgctggtgggtttagcatgggtcaagtggttcaagaagcg
gaaccagttttttcgggtgctcatgaagggctctgtttatgtgcatcacgattgcttctg
ccggtgtgggagcttcctgtcatgggttcctctgatgctacaagcggagatgggataata
ggatgcagactttcggcggaggcaatgcaagttcttgaagataaacttcggtctctagag
aagtttttaagatctagaaagaatcaaagaagaggactctatgccagtgttggtttgggg
gatatgaccggttctattctgattggggcaggtactgatatggggactggcgactggggt
atggctagaaacttatttagtccgtattctcggggtttggagtccggtaatgctgccaca
tccaataaaaggcagcggcttccttacagtcctgcagaattagcttcgatggaggtgaga
gcaatggagtgtgtaagacagctgcttcttagatgtgcggaagcgttatttcttctccaa
cttctttcccgacatcatgtgacacgcttgcttcaaagctttgaattaaatattaaacaa
gcgttacttcagttgactttccaccagttagtctgttctgaagaaggtgaccgacttgct
acaagacttgtatctgctttgatggagtattacacaggtccagatggaaggggaactgtg
gatgatatcagtggcaggttaagggaaggttgccctagcttttataaagaatctgattat
aaattttacttggctgtggaatgtcttgagaaagctgctactgcttctaataatgaagag
agggaaacactcgccagagatgccttcagtaaattgagtggagttcccgagtccgcagat
ctccaaacggtgtgcaaacgctttgaggacctaagattttatgaagctgtggttcgcttg
cctcttcagaaggcacaggctctagaccctgcaggggacgctcttaatgaacaggccgat
gctggagttctagaacatgcactcgctcagagagaacggtgctacgacattataatcagt
gctttacgctctctaaaaggggaagtgtctctaagagaatttcgttctcccatcagatca
tctgcacagtcttcccttagtccatctgataagaagaaatacatatgccagattattcaa
cttggtgtgcaatcatccgataaaatctttcatgagcatctgtaccggtccctgattgat
ttaggccttgaagatgaactcctggagtttggtgggcctgacttggtacccttcctacag
aatgctggccgtgaagctacacaagagcaccaggctgctgcttcttttacaacaggagtg
tcaccattgcgctattcaggagcaccaacaaaatactttgagcttttagcccgatactat
gtgctaaaaaggcaacatgttcttgcagctcatgtactattacggttggcagaaaggcgt
tctagtggtttggacaatatccccacacttgaccaaaggcgccaatacttgagcaatgcc
gtcatccaagccaaaagtgcaattgatggtgatagtctgacaaattcttctagagatggt
ggactgctggatttacttgaggggaagctaactgttctacagttccaaataaaaataaaa
caggaacttgagggagtagtttctaagatagaggctacacctagtacatcagaagctgcc
tcaaatgattctatggctgaatatctacaaactattaaggaaaaggtgaatgaattgtca
ctggatctgaaaaccatcacccagttatataatgattatgctgttccatttgagctttgg
gagatatgtttggaaatgctatattttgcaagctattctggagatactgatagcagcatc
gtaagagacacgtgggcacggctcatggatcaggctctctcaaagggtggcattgctgaa
gcttgttcggtactaaagaggattggttcacatgtttatccaggagacagtgctgttcta
cctttagatacattgtgtttacatcttgagaaagctgcaatggatcgattggtttcaggg
gttgaagttgttggtgacgaagatgttgcaagagctttgctggcagcttgcaagggagca
gtagaacctgttttgaacacgtatgatcatttgttatccaatggtgcaatcttgctgtca
ccgagtctgaagttaaggcttctgcggtcagtactagtagtgcttcgggaatgggcggtg
tctgtttctgcaagaggaatgggcacaagtccaatgggggcgtctctcattcttcgtgga
actttttcaatggatcaaagaactgctattaaccatggaatccgtgataagataacaagt
gctgcaaacaggtacatgactgaagtaaggaggttggcgttgccacagggccaaatagag
gttgtatacagagggtttaaagaacttgaagaatcctttttaacttctttttcttttgag
cgattttaa
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