Erigeron canadensis (horseweed): 122600308
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Entry
122600308 CDS
T07610
Name
(RefSeq) transcription initiation factor TFIID subunit 11-like
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122600308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122600308
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122600308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
DUF3246
T3SS_basalb_I
T3SS_needle_F
BSP_II
Motif
Other DBs
NCBI-GeneID:
122600308
NCBI-ProteinID:
XP_043628948
LinkDB
All DBs
Position
5:44366979..44370176
Genome browser
AA seq
211 aa
AA seq
DB search
MNQSKDPFEVAAEEHEESPPDSPVAHESTEAQTAAAPITVGSHGADTNNVVRSITSQKTT
IKSASTSAGAKAGKNKEDDDEEEEEHMDVELNKLPSSSDPSKMAKMQSILSQFTEEQMSR
YESFRRSGFQKSVMKRLLGSITGSNKISMPMTIVVSGIAKIFVGELVETAKVVMTERKET
GPIRPCHIREAHRRLKLEGKVPKRSMQRLFR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaatccaaggatccttttgaagtagcggcagaggaacacgaggaatcaccgcct
gattctccagttgctcatgaatcgaccgaagctcagactgcagcggcgccaatcactgtt
ggttctcatggagctgatacaaacaatgttgttcgttctataacctcgcaaaaaacaact
ataaagtcagcatccacatcagcaggcgccaaagctggaaagaacaaggaagatgatgac
gaggaagaagaggagcatatggatgttgaacttaataaattaccttcatcgagtgatcca
tccaagatggccaagatgcagtctattctgtcccagtttaccgaggaacaaatgagtaga
tatgaatcatttcgacggtctggatttcagaagtctgtcatgaaaagattattaggcagc
atcactggaagcaataaaatttcgatgcccatgactattgtggtgtctggaattgcaaag
atttttgtcggggaactcgttgaaacagccaaggtagtgatgacagagagaaaagagaca
ggaccaatcagaccttgtcacatacgcgaagcacacagaaggctcaaactagaaggcaag
gtaccaaaaaggtcgatgcagaggctctttcgatag
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